RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 ELOVL5Q9NYP7 299 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 NEURL1O76050 574 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 CD59P13987 128 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 CLPSP04118 112 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 SPTAN1Q13813 2472 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 HELTA6NFD8 242 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 KIAA1324LA8MWY0 1029 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 BTCP35070 178 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 MMD2Q8IY49 270 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 WASHC3Q9Y3C0 194 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 PSG7Q13046 419 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
PCDHGA11-201ENST00000398587 SNRNP200O75643 2136 aaKnown RBP12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 MFSD2BA6NFX1 497 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 SEC14L6B5MCN3 397 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 RHBDL1O75783 438 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 FA2HQ7L5A8 372 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 CYB561D1Q8N8Q1 229 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 WBP1Q96G27 269 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 GOSR1O95249 250 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 IGHV1-2P23083 117 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 SELENOTP62341 195 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 DHRS7BQ6IAN0 325 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 MEGF10Q96KG7 1140 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 WNT9BO14905 357 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 S1PR2O95136 353 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 SUMO1P63165 101 aaKnown RBP12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR8I2Q8N0Y5 310 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 SMIM8Q96KF7 97 aa12.11□□□□□ -0.47
PCDHGA11-201ENST00000398587 PMCHP20382 165 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR10J1P30954 320 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 ACP7Q6ZNF0 438 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 UCP1P25874 307 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 SSTR5P35346 364 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 RND3P61587 244 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 PCGF1Q9BSM1 259 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 CRYBA1P05813 215 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 GFI1Q99684 422 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 RSRP1Q9BUV0 290 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 C12orf77C9JDV5 145 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 F12P00748 615 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
PCDHGA11-201ENST00000398587 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 CORTO00230 105 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 NUBP1P53384 320 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 DHRS11Q6UWP2 260 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 RTBDNQ9BSG5 229 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 POLEQ07864 2286 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 IGKV3D-15A0A087WSY6 115 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 APELAP0DMC3 54 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 PAX6P26367 422 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 CAMPP49913 170 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 C9orf106Q8NAJ2 232 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR9G1Q8NH87 305 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 LYZL4Q96KX0 146 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 TCF19Q9Y242 345 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 IGHV3-72A0A0B4J1Y9 119 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZG16O60844 167 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 RANP62826 216 aaKnown RBP12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 C2orf68Q2NKX9 166 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms