RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 PKIBQ9C010 78 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 AAMDCQ9H7C9 122 aa9.48□□□□□ -0.89
HPS4-202ENST00000398145 J3QR06 171 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 COL8A1P27658 744 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 ZNF83P51522 516 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 MDP1Q86V88 176 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 TPRX1Q8N7U7 411 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 SFRP2Q96HF1 295 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 ATG101Q9BSB4 218 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
HPS4-202ENST00000398145 TMEM56-RWDD3S4R434 201 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 ZSWIM8A7E2V4 1837 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 RAB29O14966 203 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 CLDN14O95500 239 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 FAM87AP0C7U9 286 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 HINT1P49773 126 aaPredicted RBP9.47□□□□□ -0.89
HPS4-202ENST00000398145 LURAP1LQ8IV03 231 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 OR4F17Q8NGA8 305 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 TMEM54Q969K7 222 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 C18orf12Q96KH6 178 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 IL36RNQ9UBH0 155 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 PTPRDP23468 1912 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 LNP1A1A4G5 178 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 SHISA7A6NL88 538 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 ZNHIT1O43257 154 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 RTP5Q14D33 572 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
HPS4-202ENST00000398145 STPG1Q5TH74 334 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 OR2T6Q8NHC8 308 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 GAL3ST2Q9H3Q3 398 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 SAP30LQ9HAJ7 183 aa9.47□□□□□ -0.89
HPS4-202ENST00000398145 MDC1Q14676 2089 aaKnown RBP9.47□□□□□ -0.89
HPS4-202ENST00000398145 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 SOD3P08294 240 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 CCL1P22362 96 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 JOSD1Q15040 202 aaPredicted RBP9.46□□□□□ -0.89
HPS4-202ENST00000398145 GABRA6Q16445 453 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 DRAM1Q8N682 238 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 OR1L1Q8NH94 360 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 WFDC1Q9HC57 220 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 NDUFB3O43676 98 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 RBP4P02753 201 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 FGF5P12034 268 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 KLF3P57682 345 aaPredicted RBP9.46□□□□□ -0.89
HPS4-202ENST00000398145 RBPJQ06330 500 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 CYB5R2Q6BCY4 276 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 CALHM1Q8IU99 346 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 LRTM2Q8N967 370 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 OR10S1Q8NGN2 331 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 OR5R1Q8NH85 324 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 CT55Q8WUE5 264 aa9.46□□□□□ -0.89
HPS4-202ENST00000398145 hCG_38984A0A1B0GV85 526 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 MARCH11A6NNE9 402 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 ARL14EPLP0DKL9 152 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 SLC25A45Q8N413 288 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 ABCA7Q8IZY2 2146 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 TRAV17A0A0B4J275 112 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 A0A1W2PPE3 182 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 CBLN1P23435 193 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 LRRC10Q5BKY1 277 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 MMD2Q8IY49 270 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 SMRP1Q8NCR6 262 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 OR2M7Q8NG81 312 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 HIST1H2BLQ99880 126 aa9.46□□□□□ -0.9
HPS4-202ENST00000398145 SEBOXQ9HB31 216 aaPredicted RBP9.46□□□□□ -0.9
HPS4-202ENST00000398145 ID3Q02535 119 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 PYY3Q5JQD4 70 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 OR1B1Q8NGR6 318 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 SCN8AQ9UQD0 1980 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 S1PR2O95136 353 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 CLEC3BP05452 202 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 CTAG1AP78358 180 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
HPS4-202ENST00000398145 ZNF124Q15973 351 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 C10orf113Q5VZT2 155 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 MOB3BQ86TA1 216 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 UBALD2Q8IYN6 164 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 SPSB4Q96A44 273 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 FSCN3Q9NQT6 498 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 ZNF318Q5VUA4 2279 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 TNFAIP6P98066 277 aaPredicted RBP9.45□□□□□ -0.9
HPS4-202ENST00000398145 INO80CQ6PI98 192 aaPredicted RBP9.45□□□□□ -0.9
HPS4-202ENST00000398145 ZNF525Q8N782 197 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 NFAM1Q8NET5 270 aaPredicted RBP9.45□□□□□ -0.9
HPS4-202ENST00000398145 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 VWCEQ96DN2 955 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 SRXN1Q9BYN0 137 aa9.45□□□□□ -0.9
HPS4-202ENST00000398145 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 IGHV1-45A0A0A0MS14 117 aa9.44□□□□□ -0.9
HPS4-202ENST00000398145 A8MWL6 223 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms