RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 PRSS50Q9UI38 385 aa5.62□□□□□ -1.51
TM9SF4-202ENST00000398022 MEIS3P1A6NDR6 274 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4C46A6NHA9 309 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 J3KT08 172 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 EIF4E2O60573 245 aaKnown RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A6P0DMU7 189 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A5P0DMU8 189 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A7P0DMV0 189 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 HTR1DP28221 377 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 OR3A2P47893 321 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A1Q5HYN5 189 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 DNM1P46Q6ZS02 220 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF584Q8IVC4 421 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ZADH2Q8N4Q0 377 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 SUMF1Q8NBK3 374 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CT45A3Q8NHU0 189 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 FLVCR1-AS1Q8TAF5 88 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNRF4Q8WWF5 429 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 SGK494Q96LW2 274 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 GPER1Q99527 375 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 KXD1Q9BQD3 176 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ARHGEF17Q96PE2 2063 aaPredicted RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CACNA1BQ00975 2339 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A087WWL8 130 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 A0A1W2PPI3 338 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM166BA8MTA8 275 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 H3BSH0 61 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 NKX2-8O15522 239 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 GFRA3O60609 400 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 IGKV1D-16P01601 117 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CSN2P05814 226 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MMDQ15546 238 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 FNDC9Q8TBE3 224 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 TIMD4Q96H15 378 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 RETNQ9HD89 108 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ALPK2Q86TB3 2170 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 IGHV1-69-2A0A0G2JMI3 117 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MSTNO14793 375 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 OR7C1O76099 320 aaPredicted RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MPGP29372 298 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 EMP1P54849 157 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 TAS2R31P59538 309 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ARG2P78540 354 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 RPL18Q07020 188 aaKnown RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM53BQ14153 422 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF345Q14585 488 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 LRRC37A5PQ49AS3 106 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 CCL4L1Q8NHW4 92 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 OTOSQ8NHW6 89 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 STARD5Q9NSY2 213 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM74BQ9NUR3 256 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 DLL3Q9NYJ7 618 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MCTS1Q9ULC4 181 aaKnown RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 KLHDC2Q9Y2U9 406 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 WIPI2Q9Y4P8 454 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 KNL1Q8NG31 2342 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MUC22E2RYF6 1773 aaPredicted RBP5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 MPDZO75970 2070 aa5.61□□□□□ -1.51
TM9SF4-202ENST00000398022 TMEM235A6NFC5 223 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 BCL2L11O43521 198 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 TNFP01375 233 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 FOXL1Q12952 345 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ELAVL1Q15717 326 aaKnown RBP5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 GLIPR1L1Q6UWM5 242 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 C20orf196Q8IYI0 205 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 KCNRGQ8N5I3 272 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF615Q8N8J6 731 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 MDS2Q8NDY4 140 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 OR4C3Q8NH37 302 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 SDSLQ96GA7 329 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ULBP3Q9BZM4 244 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 HES4Q9HCC6 221 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 MMP26Q9NRE1 261 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM206AQ9NX38 181 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 SPANXCQ9NY87 97 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 FKBP11Q9NYL4 201 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 TCF19Q9Y242 345 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 HEATR5AQ86XA9 2040 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 C7orf77A4D0Y5 90 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 H7C1C5 153 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 K7EPK0 472 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 NUDT14O95848 222 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 ZNF43P17038 809 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 CFPP27918 469 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 SNCAP37840 140 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 LCN6P62502 163 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 WDR38Q5JTN6 314 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 FAM71E2Q8N5Q1 922 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 KIR3DL3Q8N743 410 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 PLPP5Q8NEB5 264 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 OR1J1Q8NGS3 322 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 OR2D2Q9H210 308 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 KCNS2Q9ULS6 477 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 CSMD1Q96PZ7 3565 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 CHD6Q8TD26 2715 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 PRR32B1ATL7 298 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 CD8AP01732 235 aa5.6□□□□□ -1.51
TM9SF4-202ENST00000398022 CRYGDP07320 174 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms