RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 WIPI2Q9Y4P8 454 aa13.52□□□□□ -0.24
CHMP1A-201ENST00000397901 CELSR3Q9NYQ7 3312 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 AQP7O14520 342 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 SERF2P84101 59 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 SRSF7Q16629 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 CEACAM21Q3KPI0 293 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 LYG1Q8N1E2 194 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF552Q9H707 407 aaPredicted RBP13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 CACNG5Q9UF02 275 aa13.52□□□□□ -0.25
CHMP1A-201ENST00000397901 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 PINLYPA6NC86 204 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 CNOT4O95628 575 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 CTXN2P0C2S0 81 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 ARL16Q0P5N6 197 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 RNF151Q2KHN1 245 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 PRRG4Q9BZD6 226 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 COL27A1Q8IZC6 1860 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 KIAA1324LA8MWY0 1029 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 VENTXO95231 258 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 NGFP01138 241 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 TMEM11P17152 192 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 S100GP29377 79 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 PSMB3P49720 205 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 Q0VFX4 171 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 IGFBP7Q16270 282 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF324BQ6AW86 544 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 GCNT2Q8N0V5 402 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 UBALD1Q8TB05 177 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 PSMF1Q92530 271 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 PINX1Q96BK5 328 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 OR1A1Q9P1Q5 309 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 OR2W1Q9Y3N9 320 aa13.51□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF503-AS2A6NEH8 195 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 ESDP10768 282 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 CDKN1AP38936 164 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 PLA2G5P39877 138 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 TLE1Q04724 770 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 FAM78BQ5VT40 261 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 LHX4Q969G2 390 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 RAB40CQ96S21 281 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 PPIAL4AQ9Y536 164 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 TECTAO75443 2155 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 ZDBF2Q9HCK1 2354 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF16P17020 682 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 PPP1CBP62140 327 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 SAXO1Q8IYX7 474 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 CHTOPQ9Y3Y2 248 aaKnown RBP13.5□□□□□ -0.25
CHMP1A-201ENST00000397901 LOC105371242A0A075B767 164 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 IGKV1-39P01597 117 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 IGKV1D-39P04432 117 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 TMEM144Q7Z5S9 345 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 OR1K1Q8NGR3 316 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 PSENENQ9NZ42 101 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 PPP1R3CQ9UQK1 317 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 LAMTOR2Q9Y2Q5 125 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 TRAV24A0A0B4J272 114 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 HAPLN4Q86UW8 402 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF525Q8N782 197 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 PATZ1Q9HBE1 687 aaKnown RBP13.49□□□□□ -0.25
CHMP1A-201ENST00000397901 SYNGR2O43760 224 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 ADMP35318 185 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 RNPS1Q15287 305 aaKnown RBP13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 MMP23AO75900 390 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 CD99P14209 185 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 UBE2G2P60604 165 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 MSMO1Q15800 293 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 NUDT10Q8NFP7 164 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 OR10V1Q8NGI7 309 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 RYDENQ9NUL5 291 aaKnown RBP13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 R4GN57 208 aa13.48□□□□□ -0.25
CHMP1A-201ENST00000397901 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 IGKV1-5P01602 117 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 CTRLP40313 264 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 PPP1R32Q7Z5V6 425 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 TUSC5Q8IXB3 177 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 APOBEC3DQ96AK3 386 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 PARD6GQ9BYG4 376 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 KCNS2Q9ULS6 477 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 RBM7Q9Y580 266 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 KIAA2026Q5HYC2 2103 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 ACP1P24666 158 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 MPLP40238 635 aa13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-201ENST00000397901 GFRA1P56159 465 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms