RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MGAT4CQ9UBM8 478 aa17.21■□□□□ 0.35
CPNE1-204ENST00000397443 H0Y980 276 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 SIX6O95475 246 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 IL3RAP26951 378 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 MSMO1Q15800 293 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF66Q6ZN08 573 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF833PQ6ZTB9 187 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 OR11H7Q8NGC8 314 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 LHFPL5Q8TAF8 219 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 ACANP16112 2415 aa17.2■□□□□ 0.34
CPNE1-204ENST00000397443 FAM25EA8MYX2 175 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 ADAP1O75689 374 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 SERPINE2P07093 398 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 HOXB5P09067 269 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 LDLRAD2Q5SZI1 272 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 TMEM268Q5VZI3 342 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 LIAT1Q6ZQX7 453 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 SPAG16Q8N0X2 631 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 HILPDAQ9Y5L2 63 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 HMX3A6NHT5 357 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 PFDN1O60925 122 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 FCGR3BO75015 233 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 CT45A6P0DMU7 189 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 CT45A5P0DMU8 189 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 CT45A7P0DMV0 189 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 CD83Q01151 205 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF383Q8NA42 475 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 CHAC2Q8WUX2 184 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 ST6GALNAC6Q969X2 333 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 GAB2Q9UQC2 676 aa17.19■□□□□ 0.34
CPNE1-204ENST00000397443 AMMECR1Q9Y4X0 333 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-204ENST00000397443 ODF3BA8MYP8 253 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 RPA2P15927 270 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 HTR1DP28221 377 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 BRWD1-AS2P59051 145 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 CD300CQ08708 224 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 TGIF2LXQ8IUE1 241 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF695Q8IW36 515 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 RPEQ96AT9 228 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 CHIAQ9BZP6 476 aa17.18■□□□□ 0.34
CPNE1-204ENST00000397443 TRAV40A0A0B4J280 105 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 UCP1P25874 307 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 LGALS4P56470 323 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF585BQ52M93 769 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 LYZL2Q7Z4W2 148 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 C17orf50Q8WW18 174 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 IGHV3-72A0A0B4J1Y9 119 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 CENPVL3A0A0U1RRI6 287 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 AVPP01185 164 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 LPAR6P43657 344 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 GZMKP49863 264 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 LGI3Q8N145 548 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 SLC35G3Q8N808 338 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 PRELID3BQ9Y3B1 194 aa17.17■□□□□ 0.34
CPNE1-204ENST00000397443 C13orf42A0A1B0GVH6 325 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 SULT1A3P0DMM9 295 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 SULT1A4P0DMN0 295 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 THBS3P49746 956 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 UBE2E1P51965 193 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 ZNF137PP52743 207 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 RUSC1-AS1Q66K80 236 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 AKAP14Q86UN6 197 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 DPM3Q9P2X0 92 aa17.16■□□□□ 0.34
CPNE1-204ENST00000397443 MPTX1A8MV57 137 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 LEUTXA8MZ59 168 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 CCNKO75909 580 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 S1PR2O95136 353 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 SSX2Q16385 188 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 CYB5R2Q6BCY4 276 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 SELENOHQ8IZQ5 122 aaKnown RBP17.15■□□□□ 0.34
CPNE1-204ENST00000397443 DBX1A6NMT0 343 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 H7C2Y5 167 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 CDS2O95674 445 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 IGKV1-39P01597 117 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 IGKV1D-39P04432 117 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 GATA3P23771 443 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 MOB3BQ86TA1 216 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 DDB2Q92466 427 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 WDR89Q96FK6 387 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-204ENST00000397443 NABP2Q9BQ15 211 aa17.15■□□□□ 0.34
CPNE1-204ENST00000397443 C5orf51A6NDU8 294 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 LY6LH3BQJ8 138 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 CRYZL1O95825 349 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 IGHV4-38-2P0DP08 117 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 SAA4P35542 130 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 H2BFSP57053 126 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 SRPXP78539 464 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 TPTE2P1Q5T6R2 138 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 RBPMSQ93062 196 aaKnown RBP17.14■□□□□ 0.33
CPNE1-204ENST00000397443 SEC22AQ96IW7 307 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 ADTRPQ96IZ2 230 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 TMEM56Q96MV1 263 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 RANGRFQ9HD47 186 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-204ENST00000397443 SLC35D1Q9NTN3 355 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 TMEM56-RWDD3S4R434 201 aa17.14■□□□□ 0.33
CPNE1-204ENST00000397443 A0A0B4J2A0 478 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 GAPDHP04406 335 aaKnown RBP17.13■□□□□ 0.33
CPNE1-204ENST00000397443 GGNBP1Q5YKI7 109 aa17.13■□□□□ 0.33
CPNE1-204ENST00000397443 PIP4P2Q8N4L2 257 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms