RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 LAX1Q8IWV1 398 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 BVESQ8NE79 360 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 NPBQ8NG41 125 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 SECTM1Q8WVN6 248 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 MIXL1Q9H2W2 232 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 RSL24D1Q9UHA3 163 aaKnown RBP20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 ZNF107Q9UII5 783 aaPredicted RBP20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 LINC00527Q9UJ94 153 aa20.08■□□□□ 0.81
TSPAN4-207ENST00000397411 IGKV1D-13A0A0B4J2D9 117 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 PSMB11A5LHX3 300 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 IGKV1-13P0DP09 117 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 NAT1P18440 290 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 HLA-DMAP28067 261 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 RFX2P48378 723 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 FXYD4P59646 89 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 HERV-K104P61576 105 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 SLC35B1P78383 322 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 C5orf64Q2M2E5 130 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 MCFD2Q8NI22 146 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 GIMAP1Q8WWP7 306 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 DIRAS2Q96HU8 199 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 NOL4LQ96MY1 436 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 SLC5A7Q9GZV3 580 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 ANAPC10Q9UM13 185 aa20.07■□□□□ 0.8
TSPAN4-207ENST00000397411 AP4M1O00189 453 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 RRHO14718 337 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 TPPPO94811 219 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 PPYP01298 95 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 DUTP33316 252 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 RCVRNP35243 200 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 HIST2H2BDQ6DRA6 164 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 OR4X2Q8NGF9 303 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 FCAMRQ8WWV6 532 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 C5orf30Q96GV9 206 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 GON7Q9BXV9 100 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 FBXL15Q9H469 300 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 RBMX2Q9Y388 322 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 PRELID3BQ9Y3B1 194 aa20.06■□□□□ 0.8
TSPAN4-207ENST00000397411 LINC01548A6NM66 108 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 IGKV1-16P04430 117 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 TSPAN5P62079 268 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 C2orf68Q2NKX9 166 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 NSUN5P1Q3KNT7 163 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 LYSMD2Q8IV50 215 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 DCUN1D5Q9BTE7 237 aa20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 METTL1Q9UBP6 276 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-207ENST00000397411 TCRBV4S1A1TA0A5B7 111 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 SHOXO15266 292 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 NDUFA3O95167 84 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 CSF1P09603 554 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 LGALS7P47929 136 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 DYRK1AQ13627 763 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 PSG5Q15238 335 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 OVCH2Q7RTZ1 564 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 ZNF329Q86UD4 541 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 OR6F1Q8NGZ6 308 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 CLCC1Q96S66 551 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 CITED2Q99967 270 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 HSPB9Q9BQS6 159 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 ZNF2Q9BSG1 426 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 CCL28Q9NRJ3 127 aa20.04■□□□□ 0.8
TSPAN4-207ENST00000397411 HRH1P35367 487 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 IL18Q14116 193 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 DHRS11Q6UWP2 260 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 KCTD9Q7L273 389 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 TMEM17Q86X19 198 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 STPG2Q8N412 459 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 OR52I2Q8NH67 350 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 TCTEX1D2Q8WW35 142 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 ABHD1Q96SE0 405 aa20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 HSD17B10Q99714 261 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 SLIRPQ9GZT3 109 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-207ENST00000397411 LINC00473A8K010 186 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 HLA-DRB1P01911 266 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 VDAC1P21796 283 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 KHDC1LQ5JSQ8 128 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 ZBTB34Q8NCN2 500 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 WIPF2Q8TF74 440 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 ABHD5Q8WTS1 349 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 HARBI1Q96MB7 349 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 TAS2R8Q9NYW2 309 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 RABL2AQ9UBK7 228 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 RABL2BQ9UNT1 228 aa20.02■□□□□ 0.8
TSPAN4-207ENST00000397411 ZNF701M0R085 212 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 SLC25A17O43808 307 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 FCGR3BO75015 233 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 SPDEFO95238 335 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 CRYZL1O95825 349 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 OPN1MWP04001 364 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 IFNA6P05013 189 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 OPN1MW2P0DN77 364 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 OPN1MW3P0DN78 364 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 ACTBL2Q562R1 376 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 PRR31Q5SQ13 230 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 NDUFA11Q86Y39 141 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 BORCS5Q969J3 196 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 OR51J1Q9H342 316 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 PARP11Q9NR21 331 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 KLK11Q9UBX7 282 aa20.01■□□□□ 0.79
TSPAN4-207ENST00000397411 ANK2Q01484 3957 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms