RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CYB5R2Q6BCY4 276 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 FAM71F2Q6NXP2 309 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 ZNF66Q6ZN08 573 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 OR51H1Q8NH63 302 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 CASTOR1Q8WTX7 329 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 MITD1Q8WV92 249 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 S1PR3Q99500 378 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 HSD17B10Q99714 261 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 RNF212BA8MTL3 300 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 H0Y980 276 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 ARG1P05089 322 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 LINC00205P59089 165 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 TMEM187Q14656 261 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 ANKRD55Q3KP44 614 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 SP6Q3SY56 376 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 LDLRAD2Q5SZI1 272 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 GLYATL2Q8WU03 294 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 LHX4Q969G2 390 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 AMMECR1Q9Y4X0 333 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 AUP1Q9Y679 476 aa13.73□□□□□ -0.21
TSPAN4-205ENST00000397406 A0A0B4J2A0 478 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 LY6LH3BQJ8 138 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 TGFAP01135 160 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 ANXA3P12429 323 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 UCP1P25874 307 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 IL3RAP26951 378 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 UBE2E1P51965 193 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 CATR1Q13166 79 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 IL17RELQ6ZVW7 336 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 PDZD9Q8IXQ8 264 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 C12orf45Q8N5I9 185 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 DDB2Q92466 427 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 SHPKQ9UHJ6 478 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
TSPAN4-205ENST00000397406 J3QLI3 93 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 B3GALNT1O75752 331 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 THBS3P49746 956 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 RRAS2P62070 204 aaPredicted RBP13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 LIN54Q6MZP7 749 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 LIAT1Q6ZQX7 453 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 TCTEX1D2Q8WW35 142 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 PHB2Q99623 299 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 TMEM222Q9H0R3 208 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 C7orf69Q9H7B7 122 aa13.71□□□□□ -0.22
TSPAN4-205ENST00000397406 CENPVL3A0A0U1RRI6 287 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 A0A1W2PRD5 423 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 A0A1W2PRF3 423 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 A0A1W2PRM7 423 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 DBX1A6NMT0 343 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 SSNA1O43805 119 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 AVPP01185 164 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 CT45A6P0DMU7 189 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 CT45A5P0DMU8 189 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 CT45A7P0DMV0 189 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 HTR1DP28221 377 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 ZNF585BQ52M93 769 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 LRTM2Q8N967 370 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 ZNF383Q8NA42 475 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 LHFPL5Q8TAF8 219 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 MRPL20Q9BYC9 149 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 MED28Q9H204 178 aa13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-205ENST00000397406 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 CDS2O95674 445 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 FAM157CP0CG43 387 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 REG1BP48304 166 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 ZNF816Q0VGE8 651 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 FCN2Q15485 313 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 OR2B11Q5JQS5 317 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 TPTE2P1Q5T6R2 138 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 LHFPL4Q7Z7J7 247 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 TCTEX1D1Q8N7M0 179 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 COQ8AQ8NI60 647 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 TMEM56Q96MV1 263 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 TMEM56-RWDD3S4R434 201 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 MXRA5Q9NR99 2828 aa13.69□□□□□ -0.22
TSPAN4-205ENST00000397406 LEUTXA8MZ59 168 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 RAMP3O60896 148 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 IGKV1-39P01597 117 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 IGKV1D-39P04432 117 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 MINOS1Q5TGZ0 78 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 SPAG16Q8N0X2 631 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 LGI3Q8N145 548 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms