RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DPAGT1Q9H3H5 408 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 PRDM13Q9H4Q3 707 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 FAM240BA0A1B0GVZ2 78 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 VGLL3A8MV65 326 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 PGLYRP1O75594 196 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 NDUFB6O95139 128 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 SLC6A1P30531 599 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 RPL30P62888 115 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 TUSC1Q2TAM9 212 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 RBMS3Q6XE24 437 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 ZDHHC22Q8N966 263 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 TCTEX1D2Q8WW35 142 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 CAPSLQ8WWF8 208 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 SLC2A9Q9NRM0 540 aa18.99■□□□□ 0.63
TSPAN4-203ENST00000397397 LINC00473A8K010 186 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 CD24P25063 80 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 DYNLT3P51808 116 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 PIGPP57054 158 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 AANATQ16613 207 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 KCTD9Q7L273 389 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 RTBDNQ9BSG5 229 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 C5orf66Q9H5L9 145 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 COPZ2Q9P299 210 aa18.98■□□□□ 0.63
TSPAN4-203ENST00000397397 H0YJW9 148 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 H3BUX3 64 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 APOA2P02652 100 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 RLN1P04808 185 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 CD1BP29016 333 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 RND3P61587 244 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 CATR1Q13166 79 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 HABP2Q14520 560 aaPredicted RBP18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 CCDC71LQ8N9Z2 235 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 OR51H1Q8NH63 302 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 ENKURQ8TC29 256 aa18.97■□□□□ 0.63
TSPAN4-203ENST00000397397 RNF212BA8MTL3 300 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 IGHV4-59P01825 116 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 SNRNP70P08621 437 aaKnown RBP18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 IER3P46695 156 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 TMED4Q7Z7H5 227 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 TBC1D26Q86UD7 250 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 OR5AN1Q8NGI8 311 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 ZNF418Q8TF45 676 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 RBMXL1Q96E39 390 aaKnown RBP18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 SLC35D1Q9NTN3 355 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 PRELID3BQ9Y3B1 194 aa18.96■□□□□ 0.63
TSPAN4-203ENST00000397397 FAM90A9PA6NNJ1 464 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 H7C2Y5 167 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 VENTXO95231 258 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 TCRBP04435 133 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 MC5RP33032 325 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 HES1Q14469 280 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 OR2B11Q5JQS5 317 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 ADAD2Q8NCV1 583 aaKnown RBP18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 PIFOQ8TCI5 191 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 SSMEM1Q8WWF3 244 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 DDB2Q92466 427 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 FLVCR2Q9UPI3 526 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 WASHC3Q9Y3C0 194 aa18.95■□□□□ 0.62
TSPAN4-203ENST00000397397 BTBD17A6NE02 478 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 MPPED1O15442 326 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 HOXA3O43365 443 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 IGKV1D-33P01593 117 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 IGKV1-33P01594 117 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 FAM106CPP0CH98 169 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 TAGLNQ01995 201 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 NRARPQ7Z6K4 114 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 PRIMA1Q86XR5 153 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 THNSL2Q86YJ6 484 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 TNFRSF19Q9NS68 423 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 MXRA5Q9NR99 2828 aa18.94■□□□□ 0.62
TSPAN4-203ENST00000397397 ARPC1BO15143 372 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 FCGR3BO75015 233 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 AKR1C4P17516 323 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 LY6EQ16553 131 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 RTL8BQ17RB0 113 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 CENPSQ8N2Z9 138 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 OR5R1Q8NH85 324 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 C20orf85Q9H1P6 137 aa18.93■□□□□ 0.62
TSPAN4-203ENST00000397397 TEX13DA0A0J9YY54 714 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 RRASP10301 218 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 F2RP25116 425 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 KIR2DS2P43631 304 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 CBX3Q13185 183 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 KRTAP21-3Q3LHN1 58 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 PDPNQ86YL7 162 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 SPAG16Q8N0X2 631 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 OR2T10Q8NGZ9 312 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 TMEM230Q96A57 120 aa18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 LIN7CQ9NUP9 197 aaKnown RBP18.92■□□□□ 0.62
TSPAN4-203ENST00000397397 TRAV6A0A075B6T7 132 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 MOSP00540 346 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 HNF4GQ14541 408 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 FBLN7Q53RD9 439 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 EAF1Q96JC9 268 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 NAA60Q9H7X0 242 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 NUDT15Q9NV35 164 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 TCF19Q9Y242 345 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 NUBP2Q9Y5Y2 271 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 CRYM-AS1A6NIL9 109 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 TMEM11P17152 192 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms