RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
NEDD9-203ENST00000397378 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
NEDD9-203ENST00000397378 TRAV8-7A0A075B6U6 113 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 TRBV5-5A0A0J9YX44 114 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 BMPR1BO00238 502 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 OGG1O15527 345 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 PROP1O75360 226 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 BAG2O95816 211 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 ALPLP05186 524 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 KIR2DS2P43631 304 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 LGALS7P47929 136 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
NEDD9-203ENST00000397378 RBMY1FQ15415 496 aaKnown RBP7.04□□□□□ -1.28
NEDD9-203ENST00000397378 AWAT2Q6E213 333 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 ZNF880Q6PDB4 577 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 JAGN1Q8N5M9 183 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 OR52I1Q8NGK6 324 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 IL1F10Q8WWZ1 152 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 EDARADDQ8WWZ3 215 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 SMIM19Q96E16 107 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 Q96MT0 163 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 GGTLC1Q9BX51 225 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 PARP12Q9H0J9 701 aaKnown RBP7.04□□□□□ -1.28
NEDD9-203ENST00000397378 TECRQ9NZ01 308 aaKnown RBP7.04□□□□□ -1.28
NEDD9-203ENST00000397378 CKLFQ9UBR5 152 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 TP53TG1Q9Y2A0 90 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 ORC6Q9Y5N6 252 aa7.04□□□□□ -1.28
NEDD9-203ENST00000397378 H3BNX3 289 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
NEDD9-203ENST00000397378 CRTAPO75718 401 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-203ENST00000397378 NAPSAO96009 420 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 CRYGBP07316 175 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 DEFA5Q01523 94 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 PJVKQ0ZLH3 352 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 GUCA2BQ16661 112 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 Q499Y3 187 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 SLC16A13Q7RTY0 426 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 SLC7A5P1Q8MH63 180 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 SVOPQ8N4V2 548 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 OR13C5Q8NGS8 318 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 RHOXF1Q8NHV9 184 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 AMBNQ9NP70 447 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 PAIP2BQ9ULR5 123 aaKnown RBP7.03□□□□□ -1.28
NEDD9-203ENST00000397378 PRELID1Q9Y255 219 aa7.03□□□□□ -1.28
NEDD9-203ENST00000397378 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 C2orf70A6NJV1 201 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 A6NJY4 79 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 SAC3D1A6NKF1 404 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 APOA2P02652 100 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FOLR2P14207 255 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 BMI1P35226 326 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 LINC00205P59089 165 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 RPS11P62280 158 aaKnown RBP eCLIP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 YIF1BQ5BJH7 314 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 Q6ZWC4 215 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 TMEM217Q8N7C4 229 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 ADAD2Q8NCV1 583 aaKnown RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 PTX4Q96A99 478 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 NEDD4LQ96PU5 975 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 C11orf54Q9H0W9 315 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 FGF20Q9NP95 211 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 GHRLQ9UBU3 117 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF230Q9UIE0 474 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 RPL36Q9Y3U8 105 aaKnown RBP7.02□□□□□ -1.29
NEDD9-203ENST00000397378 DNAH11Q96DT5 4516 aa7.02□□□□□ -1.29
NEDD9-203ENST00000397378 TRBV5-7A0A0A0MS05 114 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 TRBV6-6A0A0A6YYG2 114 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 LINC00854A0A1B0GVQ3 168 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 MSGN1A6NI15 193 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 LGALS9O00182 355 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 B3GALNT1O75752 331 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 OR9G9P0C7N8 305 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 ZBTB25P24278 435 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 CEACAM6P40199 344 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 RHOGP84095 191 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF45Q02386 682 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
NEDD9-203ENST00000397378 ZIK1Q3SY52 487 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-203ENST00000397378 OR2G6Q5TZ20 316 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
NEDD9-203ENST00000397378 TMPRSS11AQ6ZMR5 421 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 C6orf201Q7Z4U5 140 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-203ENST00000397378 KCNG3Q8TAE7 436 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms