RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TMEM80Q96HE8 168 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 PGLYRP3Q96LB9 341 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 TMEM68Q96MH6 324 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 DERL3Q96Q80 235 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 CLCC1Q96S66 551 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 SULT4A1Q9BR01 284 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 FAM103A1Q9BTL3 118 aaKnown RBP6.68□□□□□ -1.34
CAPN3-208ENST00000397204 RIMS4Q9H426 269 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF355PQ9NSJ1 428 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 HYDINQ4G0P3 5121 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 PROP1O75360 226 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 CA2P00918 260 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 CPEP16870 476 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 AADACP22760 399 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 ZBTB25P24278 435 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 RPS16P62249 146 aaKnown RBP6.67□□□□□ -1.34
CAPN3-208ENST00000397204 RPS27AP62979 156 aaKnown RBP6.67□□□□□ -1.34
CAPN3-208ENST00000397204 FXYD3Q14802 87 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 LCN12Q6JVE5 192 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 GLDNQ6ZMI3 551 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-208ENST00000397204 GTSCR1Q86UQ5 136 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 Q8N402 240 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 KCNG3Q8TAE7 436 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 FAM46BQ96A09 425 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 PTX4Q96A99 478 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 ABHD14BQ96IU4 210 aa6.67□□□□□ -1.34
CAPN3-208ENST00000397204 C11orf54Q9H0W9 315 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-208ENST00000397204 TRBV6-6A0A0A6YYG2 114 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 EFCAB10A6NFE3 127 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 CNIH1O95406 144 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 CD37P11049 281 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 CELP19835 753 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 MAPK3P27361 379 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 HTR2CP28335 458 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 LGALS7P47929 136 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 MECP2P51608 486 aaKnown RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 SYNJ2BPP57105 145 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 ST3GAL4Q11206 333 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 C1orf100Q5SVJ3 147 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF343Q6P1L6 599 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 LINC00322Q6ZN03 302 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 MOB1BQ7L9L4 216 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 C6orf201Q7Z4U5 140 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 HAPLN4Q86UW8 402 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 ZFP41Q8N8Y5 198 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 OR5T1Q8NG75 326 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 USMG5Q96IX5 58 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 CYYR1Q96J86 154 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 THAP7Q9BT49 309 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 TMED9Q9BVK6 235 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 TM2D1Q9BX74 207 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 TINAGL1Q9GZM7 467 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 CHMP1AQ9HD42 196 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 PLEKHJ1Q9NW61 149 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 PEF1Q9UBV8 284 aaKnown RBP6.66□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF221Q9UK13 617 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 MGAT4AQ9UM21 535 aa6.66□□□□□ -1.34
CAPN3-208ENST00000397204 ANKRD34BA5PLL1 514 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 AIREO43918 545 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 APOA2P02652 100 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 IGKV1-16P04430 117 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 CSN3P07498 182 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 TTC23Q5W5X9 447 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 GLT8D1Q68CQ7 371 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 OR10K2Q6IF99 312 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 PDPNQ86YL7 162 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 PQLC1Q8N2U9 271 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF383Q8NA42 475 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 DRAXINQ8NBI3 349 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-208ENST00000397204 OR2K2Q8NGT1 345 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 GRPEL2Q8TAA5 225 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 PHYHIPQ92561 330 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 GGHQ92820 318 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 SNAPC3Q92966 411 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 TMEM59Q9BXS4 323 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 PARP12Q9H0J9 701 aaKnown RBP6.65□□□□□ -1.34
CAPN3-208ENST00000397204 HIPK2Q9H2X6 1198 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 S100A14Q9HCY8 104 aa6.65□□□□□ -1.34
CAPN3-208ENST00000397204 SMPD3Q9NY59 655 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-208ENST00000397204 PNMA8CA0A1B0GUJ8 204 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 TMEM14DPA8MWL7 114 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 NPIPB6E9PJ23 425 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 DYNC1I1O14576 645 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 SLC25A17O43808 307 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 OR2A4O95047 310 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 CRYGBP07316 175 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 ACSM3Q53FZ2 586 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 LAX1Q8IWV1 398 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 FAM89BQ8N5H3 189 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 MS4A15Q8N5U1 240 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-208ENST00000397204 SETD9Q8NE22 299 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 SETD6Q8TBK2 473 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 PEMTQ9UBM1 199 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 CEPT1Q9Y6K0 416 aa6.64□□□□□ -1.35
CAPN3-208ENST00000397204 IZUMO1RA6ND01 250 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 TPPPO94811 219 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 IGLV2-23P01705 113 aa6.63□□□□□ -1.35
CAPN3-208ENST00000397204 SCTP09683 121 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms