RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TMEM210A6NLX4 147 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 MPV17P39210 176 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 RPS16P62249 146 aaKnown RBP13.14□□□□□ -0.31
HOXA3-202ENST00000396352 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 RAB24Q969Q5 203 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 S100PBPQ96BU1 408 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 LAMP3Q9UQV4 416 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 MLNRO43193 412 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 CLDN14O95500 239 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 TFF1P04155 84 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 DEFA4P12838 97 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 IGHV1-2P23083 117 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 CATR1Q13166 79 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF826PQ6ZT77 177 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 CXorf67Q86X51 503 aaPredicted RBP13.14□□□□□ -0.31
HOXA3-202ENST00000396352 H7BYZ3 331 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 Q8N7P7 452 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
HOXA3-202ENST00000396352 ACTR3CQ9C0K3 210 aaPredicted RBP13.14□□□□□ -0.31
HOXA3-202ENST00000396352 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 RAB29O14966 203 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 AMBPP02760 352 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 COX5AP20674 150 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 LINC00205P59089 165 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 LINC00473A8K010 186 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 HRASP01112 189 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 PKIAP61925 76 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 SPINK9Q5DT21 86 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
HOXA3-202ENST00000396352 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
HOXA3-202ENST00000396352 UNQ6494/PRO21346Q6UXR6 183 aa13.13□□□□□ -0.31
HOXA3-202ENST00000396352 PAGE4O60829 102 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 TUBG1P23258 451 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 P2RY6Q15077 328 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 KLF14Q8TD94 323 aaPredicted RBP13.12□□□□□ -0.31
HOXA3-202ENST00000396352 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
HOXA3-202ENST00000396352 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 PCGF1Q9BSM1 259 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 TECTAO75443 2155 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 TRGV5A0A0B4J1U4 118 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 GYPAP02724 150 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 NPPCP23582 126 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 PMP22Q01453 160 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 PPP5D1E7EU14 171 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 LYZL6O75951 148 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 PAX1P15863 534 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 SSTR5P35346 364 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 UBE2NP61088 152 aaKnown RBP13.12□□□□□ -0.31
HOXA3-202ENST00000396352 H2BFWTQ7Z2G1 175 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
HOXA3-202ENST00000396352 OR5B12Q96R08 314 aa13.12□□□□□ -0.31
HOXA3-202ENST00000396352 WISP2O76076 250 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 DDTP30046 118 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 GNB2P62879 340 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 ACP7Q6ZNF0 438 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 NINJ1Q92982 152 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 ANAPC16Q96DE5 110 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 GMPPAQ96IJ6 420 aaPredicted RBP13.11□□□□□ -0.31
HOXA3-202ENST00000396352 OBP2BQ9NPH6 170 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 DVL1O14640 695 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 GABRA2P47869 451 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 FAM3BP58499 235 aaPredicted RBP13.11□□□□□ -0.31
HOXA3-202ENST00000396352 JOSD1Q15040 202 aaPredicted RBP13.11□□□□□ -0.31
HOXA3-202ENST00000396352 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
HOXA3-202ENST00000396352 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 PRO1933Q9H354 126 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
HOXA3-202ENST00000396352 SPENQ96T58 3664 aaKnown RBP13.11□□□□□ -0.31
HOXA3-202ENST00000396352 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 GGCTO75223 188 aaKnown RBP13.1□□□□□ -0.31
HOXA3-202ENST00000396352 GZMBP10144 247 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 ACTL10Q5JWF8 245 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 TMEM164Q5U3C3 297 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 TCTEX1D1Q8N7M0 179 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 TMEM170AQ8WVE7 144 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 MARCH11A6NNE9 402 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 CD46P15529 392 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 MPLP40238 635 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 PDLIM4P50479 330 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 OR13A1Q8NGR1 328 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 TAAR6Q96RI8 345 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 ZDHHC11Q9H8X9 412 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 IGHV3-43A0A0B4J1X8 118 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 VENTXO95231 258 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 IGHV3-43DP0DP04 118 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF66Q6ZN08 573 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
HOXA3-202ENST00000396352 LNP1A1A4G5 178 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
HOXA3-202ENST00000396352 CDC34P49427 236 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms