RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CADP27708 2225 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 MARCH11A6NNE9 402 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 M0R036 132 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 PRRG2O14669 202 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 SNRNP70P08621 437 aaKnown RBP13.93□□□□□ -0.18
NUP50-202ENST00000396096 BMP5P22003 454 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 TNFAIP6P98066 277 aaPredicted RBP13.93□□□□□ -0.18
NUP50-202ENST00000396096 STUMQ69YW2 141 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 OR10G4Q8NGN3 311 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 DTD1Q8TEA8 209 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 CLCC1Q96S66 551 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 GCM1Q9NP62 436 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 CALYQ9NYX4 217 aa13.93□□□□□ -0.18
NUP50-202ENST00000396096 DSCAML1Q8TD84 2053 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
NUP50-202ENST00000396096 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 A0A0G2JNJ9 132 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 LY86O95711 162 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 HPRT1P00492 218 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 CRYBA1P05813 215 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 HAGHQ16775 308 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 TMEM41BQ5BJD5 291 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 R3HDM4Q96D70 268 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 TMEM147Q9BVK8 224 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 CLN8Q9UBY8 286 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 Q9UFV3 132 aa13.92□□□□□ -0.18
NUP50-202ENST00000396096 DSCAMO60469 2012 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 LOC102723971A0A1B0GUV8 181 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 ZG16O60844 167 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 TNFSF4P23510 183 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 ZNF726P1Q15940 193 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 LTC4SQ16873 150 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 C17orf58Q2M2W7 97 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 FAM234AQ9H0X4 552 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 TP53TG5Q9Y2B4 290 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 SPENQ96T58 3664 aaKnown RBP13.91□□□□□ -0.18
NUP50-202ENST00000396096 KIR2DS2P43631 304 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 RAB7AP51149 207 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 EDDM3BP56851 147 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 LINC00205P59089 165 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 PMS2P11Q13670 270 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 OR8G2PQ6IF36 304 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 Q8NA96 180 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 LRFN3Q9BTN0 628 aa13.91□□□□□ -0.18
NUP50-202ENST00000396096 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
NUP50-202ENST00000396096 DIDO1Q9BTC0 2240 aaKnown RBP13.9□□□□□ -0.18
NUP50-202ENST00000396096 TANC2Q9HCD6 1990 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 UBE2L5PA0A1B0GUS4 154 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 C16orf97H3BN30 126 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 NDUFA2O43678 99 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 PTAFRP25105 342 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 AKR1C3P42330 323 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 ZNF134P52741 427 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 GNB2P62879 340 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 RNF212Q495C1 297 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 SSX8Q7RTT4 187 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.9□□□□□ -0.18
NUP50-202ENST00000396096 HIST1H2BAQ96A08 127 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 RCC1LQ96I51 464 aaKnown RBP13.9□□□□□ -0.18
NUP50-202ENST00000396096 GFOD1Q9NXC2 390 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 CISD1Q9NZ45 108 aaKnown RBP13.9□□□□□ -0.18
NUP50-202ENST00000396096 JKAMPQ9P055 326 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 ZNF835Q9Y2P0 537 aa13.9□□□□□ -0.18
NUP50-202ENST00000396096 KBTBD11-OT1A0A1B0GTJ5 212 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 M0R1X1 148 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 MT-ND4LP03901 98 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 RAB13P51153 203 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
NUP50-202ENST00000396096 FAM201AQ5SY85 155 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 TEX36Q5VZQ5 186 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 ZNF787Q6DD87 383 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 OR10P1Q8NGE3 313 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 DDB2Q92466 427 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 GAFA1Q96PS6 74 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 C20orf24Q9BUV8 137 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 LINC00574Q9H8X3 128 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 KLF2Q9Y5W3 355 aaPredicted RBP13.89□□□□□ -0.19
NUP50-202ENST00000396096 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
NUP50-202ENST00000396096 GVINP1Q7Z2Y8 2422 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 AKAP13Q12802 2813 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 FCGR3BO75015 233 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 TSPAN9O75954 239 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 MDKP21741 143 aaPredicted RBP13.89□□□□□ -0.19
NUP50-202ENST00000396096 TMEM30BQ3MIR4 351 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 ZNF788Q6ZQV5 615 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 OR52E5Q8NH55 327 aa13.89□□□□□ -0.19
NUP50-202ENST00000396096 RAI1Q7Z5J4 1906 aaPredicted RBP13.89□□□□□ -0.19
NUP50-202ENST00000396096 DSPP15924 2871 aaKnown RBP13.88□□□□□ -0.19
NUP50-202ENST00000396096 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 H3BQ15 152 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 CD55P08174 381 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms