RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SLC10A1Q14973 349 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 Q3ZCU0 254 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 NECAP1Q8NC96 275 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 PCGF1Q9BSM1 259 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 IFNL4K9M1U5 179 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 CDIPTO14735 213 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 SPINT2O43291 252 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 IL18BPO95998 194 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 MT-CO2P00403 227 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 PDGFBP01127 241 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 ADH4P08319 380 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 CELA3AP09093 270 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF883P0CG24 379 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 CD46P15529 392 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 OR3A1P47881 315 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 NUBP1P53384 320 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF816Q0VGE8 651 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 SSX2Q16385 188 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 INO80CQ6PI98 192 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 TIPARPQ7Z3E1 657 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 RHOVQ96L33 236 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 CLN8Q9UBY8 286 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 WDR83OSQ9Y284 106 aa8.44□□□□□ -1.06
UBE2D3-208ENST00000394803 MDFIC2A0A1B0GVS7 189 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 A8MWP6 167 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 C12orf77C9JDV5 145 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 MLNRO43193 412 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 S1PR2O95136 353 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 HBZP02008 142 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 SP1P08047 785 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 MDKP21741 143 aaPredicted RBP8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 WDR86Q86TI4 376 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 MRPL41Q8IXM3 137 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 C1orf174Q8IYL3 243 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 MEGF10Q96KG7 1140 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 FER1L6-AS2Q96M78 137 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 CXXC4Q9H2H0 198 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 OR51B6Q9H340 312 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 PRO1933Q9H354 126 aa8.43□□□□□ -1.06
UBE2D3-208ENST00000394803 ZG16O60844 167 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 TDGF1P13385 188 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 CD1BP29016 333 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 KIR2DS2P43631 304 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 MEOX1P50221 254 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 HTD2P86397 168 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 PAX5Q02548 391 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF766Q5HY98 468 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 DCAF10Q5QP82 559 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 SPATA46Q5T0L3 261 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 RAB9BQ9NP90 201 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 FUT9Q9Y231 359 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 SDK2Q58EX2 2172 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 TRAV39A0A0B4J263 110 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF705GA8MUZ8 300 aaPredicted RBP8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 RAMP3O60896 148 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 GZMHP20718 246 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 HOXC12P31275 282 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 OPRK1P41145 380 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 GABRA2P47869 451 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 SPCS3P61009 180 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 ERVK-16P61578 105 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 SMIM21Q3B7S5 101 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 MRPL52Q86TS9 123 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 OR52E5Q8NH55 327 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 OR1L1Q8NH94 360 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 PPP1R35Q8TAP8 253 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 OBP2BQ9NPH6 170 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 ARHGAP21Q5T5U3 1957 aa8.42□□□□□ -1.06
UBE2D3-208ENST00000394803 MARCH11A6NNE9 402 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 RBFOX2O43251 390 aaKnown RBP eCLIP8.41□□□□□ -1.061e-7■□□□□ 10
UBE2D3-208ENST00000394803 CXorf1O96002 111 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 HPRT1P00492 218 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 GRPP07492 148 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 CD55P08174 381 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 PMP22Q01453 160 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 TFF3Q07654 80 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 USF2Q15853 346 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 LINC01551Q86U37 167 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF808Q8N4W9 903 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 GBGT1Q8N5D6 347 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 SLC25A40Q8TBP6 338 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 TMEM37Q8WXS4 190 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 R3HDM4Q96D70 268 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 WDYHV1Q96HA8 205 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 A0A0U1RQK1 487 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 C17orf98A8MV24 154 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 A8MXE2 369 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 C1QTNF9BB2RNN3 333 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 PATE3B3GLJ2 98 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 RAB31Q13636 194 aa8.41□□□□□ -1.06
UBE2D3-208ENST00000394803 PDLIM3Q53GG5 364 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms