RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SMDT1Q9H4I9 107 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 DKK4Q9UBT3 224 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 SOD3P08294 240 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 PYY3Q5JQD4 70 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.61
GTF2F1-201ENST00000394456 HOXA5P20719 270 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 IL2RGP31785 369 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 CD81P60033 236 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 TCTEX1D2Q8WW35 142 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 FRZBQ92765 325 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 GGACTQ9BVM4 153 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 HOXC12P31275 282 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 GCSAMLQ5JQS6 135 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 C1QL4Q86Z23 238 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 ZNF610Q8N9Z0 462 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 WDR31Q8NA23 367 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 GPR61Q9BZJ8 451 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 UNKLQ9H9P5 680 aaKnown RBP11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 CISD1Q9NZ45 108 aaKnown RBP11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
GTF2F1-201ENST00000394456 BSNQ9UPA5 3926 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 A0A087WWC5 75 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 IQCF6A8MYZ5 107 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 COL10A1Q03692 680 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 Q3ZCU0 254 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 MOB1BQ7L9L4 216 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 RPRMLQ8N4K4 120 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 ZNF645Q8N7E2 425 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 LHX4Q969G2 390 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 GALMQ96C23 342 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 TMEM30CPA0ZSE6 113 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 TNFSF13O75888 250 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 RAC2P15153 192 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 EGR1P18146 543 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 TMEM41BQ5BJD5 291 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 INO80CQ6PI98 192 aaPredicted RBP11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 WDR82Q6UXN9 313 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 SEM1Q6ZVN7 128 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
GTF2F1-201ENST00000394456 PROP1O75360 226 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 ZNF737O75373 536 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 RBMXL2O75526 392 aaKnown RBP11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 P0C879 139 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 TRGC1P0CF51 173 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 COX5AP20674 150 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 HBG1P69891 147 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 HBG2P69892 147 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 HES4Q9HCC6 221 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 TREM2Q9NZC2 230 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 CECR9P0C854 216 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 ADIRFQ15847 76 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 STARD4Q96DR4 205 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 KCNIP1Q9NZI2 227 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
GTF2F1-201ENST00000394456 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 TIMM8AO60220 97 aaPredicted RBP11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 C9orf152Q5JTZ5 239 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 FAM209BQ5JX69 171 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 Q8IYB0 196 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 PSMG3Q9BT73 122 aaPredicted RBP11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 WNT2P09544 360 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 FGF7P21781 194 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 S100A12P80511 92 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 SNIP1Q8TAD8 396 aaKnown RBP11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
GTF2F1-201ENST00000394456 CDX1P47902 265 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms