RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CT45A7P0DMV0 189 aa19.67■□□□□ 0.74
LRFN4-202ENST00000393952 TRAV40A0A0B4J280 105 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 THBS3P49746 956 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 BCAP31P51572 246 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 BRWD1-AS2P59051 145 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 TGIF2LXQ8IUE1 241 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 ZNF383Q8NA42 475 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 RPEQ96AT9 228 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 PHB2Q99623 299 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 TMEM222Q9H0R3 208 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 DPM3Q9P2X0 92 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 A8MV72 311 aaPredicted RBP19.66■□□□□ 0.74
LRFN4-202ENST00000393952 LEUTXA8MZ59 168 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 UCP1P25874 307 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 LGALS4P56470 323 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 TPTE2P1Q5T6R2 138 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 LIAT1Q6ZQX7 453 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 LHFPL5Q8TAF8 219 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 DDB2Q92466 427 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 ADTRPQ96IZ2 230 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 MED28Q9H204 178 aa19.66■□□□□ 0.74
LRFN4-202ENST00000393952 TEX15Q9BXT5 2789 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 NPFFO15130 113 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 IGHV4-38-2P0DP08 117 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 ZNF585BQ52M93 769 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 RUSC1-AS1Q66K80 236 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 SPAG16Q8N0X2 631 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 COQ8AQ8NI60 647 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 C17orf50Q8WW18 174 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 NABP2Q9BQ15 211 aa19.65■□□□□ 0.74
LRFN4-202ENST00000393952 A0A0B4J2A0 478 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 IGHV1-69DA0A0B4J2H0 117 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 RAMP3O60896 148 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 B3GALNT1O75752 331 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 IGHV1-69P01742 117 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 GAPDHP04406 335 aaKnown RBP19.64■□□□□ 0.73
LRFN4-202ENST00000393952 RRAS2P62070 204 aaPredicted RBP19.64■□□□□ 0.73
LRFN4-202ENST00000393952 FCN2Q15485 313 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 MINOS1Q5TGZ0 78 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 RBMXL1Q96E39 390 aaKnown RBP19.64■□□□□ 0.73
LRFN4-202ENST00000393952 SHPKQ9UHJ6 478 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 HILPDAQ9Y5L2 63 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 MINOS1-NBL1R4GNA1 71 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 ZNF469Q96JG9 3925 aaPredicted RBP19.64■□□□□ 0.73
LRFN4-202ENST00000393952 CSPG4Q6UVK1 2322 aa19.64■□□□□ 0.73
LRFN4-202ENST00000393952 FCGR3BO75015 233 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 SERPINE2P07093 398 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 SAA4P35542 130 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 CEACAM3P40198 252 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 C2orf68Q2NKX9 166 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 KLF17Q5JT82 389 aaPredicted RBP19.63■□□□□ 0.73
LRFN4-202ENST00000393952 GPR157Q5UAW9 335 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 PIP4P2Q8N4L2 257 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 PRELID3BQ9Y3B1 194 aa19.63■□□□□ 0.73
LRFN4-202ENST00000393952 TBL2Q9Y4P3 447 aaKnown RBP19.63■□□□□ 0.73
LRFN4-202ENST00000393952 PAX6P26367 422 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 LPAR6P43657 344 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 ZNF816Q0VGE8 651 aaPredicted RBP19.62■□□□□ 0.73
LRFN4-202ENST00000393952 MIDNQ504T8 468 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 LGI3Q8N145 548 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 TCTEX1D1Q8N7M0 179 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 AJUBAQ96IF1 538 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 ACANP16112 2415 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 OTOGQ6ZRI0 2925 aa19.62■□□□□ 0.73
LRFN4-202ENST00000393952 IGHV1-3A0A0C4DH29 117 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 CDS2O95674 445 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 SRPXP78539 464 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 KRTAP1-1Q07627 177 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 TMEM268Q5VZI3 342 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 BRD3OSQ6XYD6 125 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 SELENOHQ8IZQ5 122 aaKnown RBP19.61■□□□□ 0.73
LRFN4-202ENST00000393952 DYNAPQ8N1N2 210 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 TMEM56Q96MV1 263 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 TMEM56-RWDD3S4R434 201 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 A0A1W2PPI3 338 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 HMX3A6NHT5 357 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 DBX1A6NMT0 343 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 H0YJW9 148 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 TXNL1O43396 289 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 IGKV1-39P01597 117 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 IGKV1D-39P04432 117 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 EPHA1P21709 976 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 KIR2DS2P43631 304 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 SSX2Q16385 188 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 MOB3BQ86TA1 216 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 ZNF695Q8IW36 515 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 LRTM2Q8N967 370 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 OR11H7Q8NGC8 314 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 OR5AN1Q8NGI8 311 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 FAM212BQ9NTI7 297 aaPredicted RBP19.61■□□□□ 0.73
LRFN4-202ENST00000393952 SLC35D1Q9NTN3 355 aa19.61■□□□□ 0.73
LRFN4-202ENST00000393952 IGHV3-72A0A0B4J1Y9 119 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 CCSO14618 274 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 ADAP1O75689 374 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 S1PR2O95136 353 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 SULT1A3P0DMM9 295 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 SULT1A4P0DMN0 295 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 LYZL2Q7Z4W2 148 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 C18orf12Q96KH6 178 aa19.6■□□□□ 0.73
LRFN4-202ENST00000393952 MGAT4CQ9UBM8 478 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms