RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 STAG3L2P0CL84 134 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 HOXA4Q00056 320 aaPredicted RBP11.29□□□□□ -0.6
LCA5-202ENST00000392959 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 HS3ST3B1Q9Y662 390 aa11.29□□□□□ -0.6
LCA5-202ENST00000392959 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
LCA5-202ENST00000392959 DLX1P56177 255 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 RELBQ01201 579 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 C21orf62-AS1Q17RA5 79 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 MYOFQ9NZM1 2061 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 MC5RP33032 325 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
LCA5-202ENST00000392959 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 ODAMA1E959 279 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 FGF5P12034 268 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 CD82P27701 267 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 PMCHL1Q16048 86 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
LCA5-202ENST00000392959 ZG16O60844 167 aa11.27□□□□□ -0.6
LCA5-202ENST00000392959 PLAUP00749 431 aa11.27□□□□□ -0.6
LCA5-202ENST00000392959 TRGC1P0CF51 173 aa11.27□□□□□ -0.6
LCA5-202ENST00000392959 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.6
LCA5-202ENST00000392959 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.6
LCA5-202ENST00000392959 PRDM14Q9GZV8 571 aa11.27□□□□□ -0.6
LCA5-202ENST00000392959 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.6
LCA5-202ENST00000392959 PGPA6NDG6 321 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 MARCH11A6NNE9 402 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.61
LCA5-202ENST00000392959 IGKV3-11P04433 115 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 MGPP08493 103 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 NMUP48645 174 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 CLDN18P56856 261 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 NPBWR2P48146 333 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 ZNF818PQ6ZRF7 136 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
LCA5-202ENST00000392959 PARLQ9H300 379 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 RNF224P0DH78 156 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 GLIPR1P48060 266 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 ITLN1Q8WWA0 313 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 TMEM45BQ96B21 275 aa11.27□□□□□ -0.61
LCA5-202ENST00000392959 SCARF2Q96GP6 870 aaPredicted RBP11.27□□□□□ -0.61
LCA5-202ENST00000392959 ZNFX1Q9P2E3 1918 aaKnown RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 LOC389332A0A1B0GUA5 103 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 IGHMP01871 453 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 SSTR5P35346 364 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 KIR2DL2P43627 348 aaPredicted RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 A0A0B4J293 547 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 C17orf51A8MQB3 221 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 KBTBD11O94819 623 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 COX5BP10606 129 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 C2orf68Q2NKX9 166 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 WNT5BQ9H1J7 359 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 UQCR10Q9UDW1 63 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 COL4A5P29400 1685 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 TDRD15B5MCY1 1934 aaKnown RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 SPAARA0A1B0GVQ0 90 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 ECSCRQ19T08 205 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 HCP5Q6MZN7 132 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 DOCK3Q8IZD9 2030 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 CA2P00918 260 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 RND2P52198 227 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 ZNF658BQ4V348 819 aaPredicted RBP11.26□□□□□ -0.61
LCA5-202ENST00000392959 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 DMRT1Q9Y5R6 373 aa11.26□□□□□ -0.61
LCA5-202ENST00000392959 INTS1Q8N201 2190 aaKnown RBP11.25□□□□□ -0.61
LCA5-202ENST00000392959 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 SPSB4Q96A44 273 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 RABAC1Q9UI14 185 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 A8MXK9 166 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 DLL1O00548 723 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 HTN1P15515 57 aa11.25□□□□□ -0.61
LCA5-202ENST00000392959 C12orf54Q6X4T0 127 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms