RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 USF3Q68DE3 2245 aa17.57■□□□□ 0.4
SPHK1-202ENST00000392496 MYO18BQ8IUG5 2567 aa17.57■□□□□ 0.4
SPHK1-202ENST00000392496 FAM90A26D6RGX4 464 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 RBFOX2O43251 390 aaKnown RBP eCLIP17.56■□□□□ 0.4
SPHK1-202ENST00000392496 SOD3P08294 240 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 RRASP10301 218 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 KIR2DS2P43631 304 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 MRPS11P82912 194 aaKnown RBP17.56■□□□□ 0.4
SPHK1-202ENST00000392496 EWSR1Q01844 656 aaKnown RBP eCLIP17.56■□□□□ 0.4
SPHK1-202ENST00000392496 RAB40CQ96S21 281 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 FAM24AA6NFZ4 105 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 TOR1AO14656 332 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 KRASP01116 189 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 G6PCP35575 357 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 LINC00205P59089 165 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 FAM74A1Q5RGS3 127 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 SLC25A48Q6ZT89 311 aaKnown RBP17.56■□□□□ 0.4
SPHK1-202ENST00000392496 PRELID3BQ9Y3B1 194 aa17.56■□□□□ 0.4
SPHK1-202ENST00000392496 NXPH3O95157 252 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 HPRT1P00492 218 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 CCL3L1P16619 93 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 IGFBP2P18065 325 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 CAV2P51636 162 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 COMMD7Q86VX2 200 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 ODF3L1Q8IXM7 274 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 TMEM252Q8N6L7 170 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 RAB39BQ96DA2 213 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 BSCL2Q96G97 398 aaPredicted RBP17.55■□□□□ 0.4
SPHK1-202ENST00000392496 CITED4Q96RK1 184 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 ZNF251Q9BRH9 671 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 SMIM3Q9BZL3 60 aa17.55■□□□□ 0.4
SPHK1-202ENST00000392496 SAA2-SAA4A0A096LPE2 208 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 TRBV23-1A0A0A0MS06 115 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 A0A1W2PPE3 182 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 IGSF23A1L1A6 192 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 ANKRD34BA5PLL1 514 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 TMEM50AO95807 157 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 SAA2P0DJI9 122 aaPredicted RBP17.54■□□□□ 0.4
SPHK1-202ENST00000392496 PAX9P55771 341 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 NHLH2Q02577 135 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 EIF5AL1Q6IS14 154 aaKnown RBP17.54■□□□□ 0.4
SPHK1-202ENST00000392496 UBAC2Q8NBM4 344 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 LRRC20Q8TCA0 184 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 DDB2Q92466 427 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 ADTRPQ96IZ2 230 aa17.54■□□□□ 0.4
SPHK1-202ENST00000392496 C19orf84I3L1E1 186 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 SYNGR2O43760 224 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 FCGR3BO75015 233 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 THBS3P49746 956 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 GNG10P50151 68 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 RPL23AP62750 156 aaKnown RBP17.53■□□□□ 0.4
SPHK1-202ENST00000392496 BAXQ07812 192 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 MIDNQ504T8 468 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 CLEC9AQ6UXN8 241 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 LYG1Q8N1E2 194 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 CXorf58Q96LI9 332 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 S1PR3Q99500 378 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 ABCA4P78363 2273 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 YLPM1P49750 1951 aaKnown RBP17.53■□□□□ 0.4
SPHK1-202ENST00000392496 BORCS7-ASMTA0A0B4J1R7 106 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 GPR37O15354 613 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 DLX6P56179 175 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 TMEM155Q4W5P6 130 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 C1orf229Q6ZS94 237 aaPredicted RBP17.53■□□□□ 0.4
SPHK1-202ENST00000392496 H2BFWTQ7Z2G1 175 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 ARV1Q9H2C2 271 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.53■□□□□ 0.4
SPHK1-202ENST00000392496 WSB1Q9Y6I7 421 aa17.53■□□□□ 0.4
SPHK1-202ENST00000392496 A0A1W2PPR1 153 aa17.52■□□□□ 0.4
SPHK1-202ENST00000392496 TMED6Q8WW62 240 aa17.52■□□□□ 0.4
SPHK1-202ENST00000392496 R3HDM4Q96D70 268 aa17.52■□□□□ 0.4
SPHK1-202ENST00000392496 WFDC1Q9HC57 220 aa17.52■□□□□ 0.4
SPHK1-202ENST00000392496 MARCH11A6NNE9 402 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 FGF16O43320 207 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 ARHGDIBP52566 201 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 TAS2R30P59541 319 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 ZNF841Q6ZN19 808 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 ZNF295-AS1Q8N0V1 137 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 C8orf31Q8N9H6 132 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 HSPB7Q9UBY9 170 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 FAM90A9PA6NNJ1 464 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 MED6O75586 246 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 RNF141Q8WVD5 230 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 RAB1CQ92928 201 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 TIMD4Q96H15 378 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 SMIM8Q96KF7 97 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 MIOXQ9UGB7 285 aa17.51■□□□□ 0.39
SPHK1-202ENST00000392496 ERVFRD-1P60508 538 aa17.5■□□□□ 0.39
SPHK1-202ENST00000392496 TNFRSF9Q07011 255 aa17.5■□□□□ 0.39
SPHK1-202ENST00000392496 OR4S2Q8NH73 311 aa17.5■□□□□ 0.39
SPHK1-202ENST00000392496 SPTBN1Q01082 2364 aaKnown RBP17.49■□□□□ 0.39
SPHK1-202ENST00000392496 TXNL1O43396 289 aa17.49■□□□□ 0.39
SPHK1-202ENST00000392496 UBE2KP61086 200 aa17.49■□□□□ 0.39
SPHK1-202ENST00000392496 AVPI1Q5T686 147 aa17.49■□□□□ 0.39
SPHK1-202ENST00000392496 LINC00311Q8N616 119 aa17.49■□□□□ 0.39
SPHK1-202ENST00000392496 ZNF596Q8TC21 504 aa17.49■□□□□ 0.39
SPHK1-202ENST00000392496 A0A087X0M5 115 aa17.48■□□□□ 0.39
SPHK1-202ENST00000392496 A0A1B0GX30 115 aa17.48■□□□□ 0.39
SPHK1-202ENST00000392496 NQO2P16083 231 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms