RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ODAMA1E959 279 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF320A2RRD8 509 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 Q6P435 159 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 TMEM105Q8N8V8 129 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 MAFAQ8NHW3 353 aaPredicted RBP15.14■□□□□ 0.01
ERCC2-201ENST00000391941 PSPNO60542 156 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 NDUFB4O95168 129 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 HRASP01112 189 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 IL3RAP26951 378 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 OR3A1P47881 315 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 EDDM3BP56851 147 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 LINC00696Q6ZRV3 163 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 PYGO2Q9BRQ0 406 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 NDUFAF3Q9BU61 184 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 MSL2Q9HCI7 577 aa15.14■□□□□ 0.01
ERCC2-201ENST00000391941 PAX1P15863 534 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 BRWD1-AS2P59051 145 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 ACSF3Q4G176 576 aaPredicted RBP15.13■□□□□ 0.01
ERCC2-201ENST00000391941 ASPHD1Q5U4P2 390 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 TMEM45BQ96B21 275 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 AGMATQ9BSE5 352 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 B4E171 279 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 C11orf94C9JXX5 98 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.13■□□□□ 0.01
ERCC2-201ENST00000391941 CYB561P49447 251 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 AESQ08117 197 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 SLC10A1Q14973 349 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 VKORC1L1Q8N0U8 176 aa15.13■□□□□ 0.01
ERCC2-201ENST00000391941 NRN1LQ496H8 165 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 TIPARPQ7Z3E1 657 aaKnown RBP15.12■□□□□ 0.01
ERCC2-201ENST00000391941 RNASEH2CQ8TDP1 164 aaKnown RBP15.12■□□□□ 0.01
ERCC2-201ENST00000391941 FZR1Q9UM11 496 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 MKRN2OSH3BPM6 223 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 RPL29P47914 159 aaKnown RBP15.12■□□□□ 0.01
ERCC2-201ENST00000391941 GNG3P63215 75 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF573Q86YE8 665 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 C2orf88Q9BSF0 95 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 LIN7CQ9NUP9 197 aaKnown RBP15.12■□□□□ 0.01
ERCC2-201ENST00000391941 ATMQ13315 3056 aa15.12■□□□□ 0.01
ERCC2-201ENST00000391941 RBFOX2O43251 390 aaKnown RBP eCLIP15.11■□□□□ 0.01
ERCC2-201ENST00000391941 SS18L1O75177 396 aaPredicted RBP15.11■□□□□ 0.01
ERCC2-201ENST00000391941 ACTL10Q5JWF8 245 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 TMEM14EPQ6UXP3 125 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 LINC00596Q86U02 117 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 SCCPDHQ8NBX0 429 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 TMEM170AQ8WVE7 144 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 PIGBOS1A0A0B4J2F0 54 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 NXPH2O95156 264 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 GNB1P62873 340 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 NPCDR1Q9BY65 106 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 OR6C3Q9NZP0 311 aa15.11■□□□□ 0.01
ERCC2-201ENST00000391941 F2Z2F3 143 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 LHX2P50458 406 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 Q6ZR03 302 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 MRGPRDQ8TDS7 321 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 ACTR3CQ9C0K3 210 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 MAP1BP46821 2468 aaKnown RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF705FA8MVS1 300 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 SPINK4O60575 86 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF705DP0CH99 300 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF705BP0CI00 300 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 SSTR5P35346 364 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 POLR3KQ9Y2Y1 108 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 RP1L1Q8IWN7 2480 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 TNRC6AQ8NDV7 1962 aaKnown RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 TRBV20OR9-2A0A075B6H5 130 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 IGKV3D-15A0A087WSY6 115 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 PDGFBP01127 241 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 WNT2P09544 360 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 MRPL37Q9BZE1 423 aaKnown RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 UBE2ZQ9H832 354 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-201ENST00000391941 TRAPPC1Q9Y5R8 145 aa15.1■□□□□ 0.01
ERCC2-201ENST00000391941 LRP5LA4QPB2 252 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 NPIPB11E5RHQ5 1161 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 NUTF2P61970 127 aaKnown RBP15.09■□□□□ 0.01
ERCC2-201ENST00000391941 BATFQ16520 125 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 COA6Q5JTJ3 125 aaKnown RBP15.09■□□□□ 0.01
ERCC2-201ENST00000391941 MDP1Q86V88 176 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 TGIF2LYQ8IUE0 185 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 DTD1Q8TEA8 209 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 APH1AQ96BI3 265 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 PARD6GQ9BYG4 376 aaPredicted RBP15.09■□□□□ 0.01
ERCC2-201ENST00000391941 LINC00470Q9BZP3 86 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 CTXND1A0A1B0GTU2 59 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 TMEM250H0YL14 139 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 CNN1P51911 297 aaKnown RBP15.09■□□□□ 0.01
ERCC2-201ENST00000391941 CLDN18P56856 261 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 ZNF497Q6ZNH5 498 aa15.09■□□□□ 0.01
ERCC2-201ENST00000391941 CENPVQ7Z7K6 275 aaPredicted RBP15.09■□□□□ 0.01
ERCC2-201ENST00000391941 LINC00473A8K010 186 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 SLC17A3O00476 420 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 LINC01551Q86U37 167 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 OR10P1Q8NGE3 313 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 NEU1Q99519 415 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 STRADBQ9C0K7 418 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 FKBP11Q9NYL4 201 aa15.08■□□□□ 0.01
ERCC2-201ENST00000391941 KALRNO60229 2985 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms