RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 C19orf54Q5BKX5 351 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 BHLHA15Q7RTS1 189 aaPredicted RBP13.94□□□□□ -0.18
SHANK1-204ENST00000391814 TCF23Q7RTU1 214 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 WDR54Q9H977 334 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 CD160O95971 181 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 GUSBP11Q6P575 273 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 TXNDC17Q9BRA2 123 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
SHANK1-204ENST00000391814 TPRX1Q8N7U7 411 aa13.94□□□□□ -0.18
SHANK1-204ENST00000391814 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
SHANK1-204ENST00000391814 TRAV8-6A0A0B4J262 113 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 GZMHP20718 246 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 HIST1H1AQ02539 215 aaPredicted RBP13.93□□□□□ -0.18
SHANK1-204ENST00000391814 HYAL1Q12794 435 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 NUDT10Q8NFP7 164 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 UNQ9370/PRO34162Q6UXP9 181 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 SPRED2Q7Z698 418 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 PLA2G2FQ9BZM2 168 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 CISD3P0C7P0 127 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 LDLRAD2Q5SZI1 272 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 FAM53AQ6NSI3 398 aaPredicted RBP13.93□□□□□ -0.18
SHANK1-204ENST00000391814 FGFRL1Q8N441 504 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 ELOVL5Q9NYP7 299 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 DLX6P56179 175 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 LRRC75BQ2VPJ9 315 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 SLC25A40Q8TBP6 338 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 H3BTX0 84 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 GABRG2P18507 467 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
SHANK1-204ENST00000391814 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
SHANK1-204ENST00000391814 MKRN2OSH3BPM6 223 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 RAC3P60763 192 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 GPBAR1Q8TDU6 330 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 SMIM8Q96KF7 97 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 C18orf15Q96N68 181 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 SHISA3A0PJX4 238 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 ZIC3O60481 467 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 HBBP68871 147 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 LPAR2Q9HBW0 351 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 LOC101059948A0A1B0GTJ6 334 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 UBE2L6O14933 153 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 NGFRP08138 427 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 CTSSP25774 331 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 ZNF414Q96IQ9 312 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 SIGMAR1Q99720 223 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 LMO7DNF2Z398 122 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 DLL1O00548 723 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 FOXA3P55318 350 aaPredicted RBP13.92□□□□□ -0.18
SHANK1-204ENST00000391814 DYNLRB2Q8TF09 96 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 TMUB1Q9BVT8 246 aa13.92□□□□□ -0.18
SHANK1-204ENST00000391814 SCO2A0A1W2PP80 73 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 F2RL2O00254 374 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 RNF222A6NCQ9 220 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 UCP3P55916 312 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 FGF12P61328 243 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 LINC00470Q9BZP3 86 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 BTAF1O14981 1849 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 CLDN14O95500 239 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 ANOS1P23352 680 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 PRR7Q8TB68 274 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 ABCA3Q99758 1704 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 SDK1Q7Z5N4 2213 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 K7EQS6 105 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 ERGP11308 486 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 GCHFRP30047 84 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 CEACAM3P40198 252 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 UNC119Q13432 240 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 C9orf40Q8IXQ3 194 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 OR2H2O95918 312 aa13.91□□□□□ -0.18
SHANK1-204ENST00000391814 SERF1AO75920 110 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 PRSS2P07478 247 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 STAG3L3P0CL85 134 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 SNAI3Q3KNW1 292 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 YBX2Q9Y2T7 364 aaKnown RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 SPEM2Q0P670 501 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 ZNF385AQ96PM9 386 aaKnown RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 ATXN7O15265 892 aaPredicted RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 S1PR2O95136 353 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 OR5A1Q8NGJ0 315 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 GPR183P32249 361 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 BTCP35070 178 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 INSIG2Q9Y5U4 225 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 SCN1AP35498 2009 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 VENTXO95231 258 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 NUTF2P61970 127 aaKnown RBP13.9□□□□□ -0.18
SHANK1-204ENST00000391814 DPH3P1Q9H4G8 78 aa13.9□□□□□ -0.18
SHANK1-204ENST00000391814 LIPFP07098 398 aa13.9□□□□□ -0.19
SHANK1-204ENST00000391814 FCGR2BP31994 310 aaPredicted RBP13.9□□□□□ -0.19
SHANK1-204ENST00000391814 TMEM95Q3KNT9 176 aa13.9□□□□□ -0.19
SHANK1-204ENST00000391814 CEACAM21Q3KPI0 293 aa13.9□□□□□ -0.19
SHANK1-204ENST00000391814 GFI1BQ5VTD9 330 aa13.9□□□□□ -0.19
SHANK1-204ENST00000391814 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms