RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TMEM9BQ9NQ34 198 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 C14orf105Q9NVL8 296 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SPANXCQ9NY87 97 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 DNAJC27Q9NZQ0 273 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CALML5Q9NZT1 146 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 DHCR7Q9UBM7 475 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GLS2Q9UI32 602 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 HSPB8Q9UJY1 196 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GNG8Q9UK08 70 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 BTRCQ9Y297 605 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PKIGQ9Y2B9 76 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 RBM7Q9Y580 266 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OVOS2A0A0J9YW53 1432 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OVOS2Q6IE36 1432 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CD109Q6YHK3 1445 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 YTHDC2Q9H6S0 1430 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 A2MP01023 1474 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 VWA8A3KMH1 1905 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SEC16AO15027 2179 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 MUC6Q6W4X9 2439 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 CITO14578 2027 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 NAV1Q8NEY1 1877 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 PIK3C2GO75747 1445 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 WRNQ14191 1432 aaPredicted RBP eCLIP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FGD6Q6ZV73 1430 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 BORCS7-ASMTA0A0B4J1R7 106 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IGLV1-36A0A0B4J1U3 117 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IGKV1D-13A0A0B4J2D9 117 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 A0A0U1RQV1 116 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FAM236DA0A1B0GTK5 79 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 TEX50A0A1B0GTY4 177 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 A0A1B0GX51 115 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 A0A1B0GXF2 115 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 hADV38S2A0JD32 116 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MYBPHLA2RUH7 354 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM189A5PLL7 270 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 E7EQ34 232 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 J3QT63 122 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 K7ERU9 68 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MRASO14807 208 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GYG2O15488 501 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GGCTO75223 188 aaKnown RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 REM1O75628 298 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 UPK1BO75841 260 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 AIFM1O95831 613 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 EPPINO95925 133 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FAM107AO95990 144 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 CCNE2O96020 404 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IGHG2P01859 326 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 SLC35G6P0C7Q6 338 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF806P0C7X5 589 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 UBBP0CG47 229 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IGKV1-13P0DP09 117 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FAM236CP0DP71 79 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IL1RNP18510 177 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ATF1P18846 271 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GGT1P19440 569 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 CXCL2P19875 107 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 PRTN3P24158 256 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 KDELR1P24390 212 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 PSMB9P28065 219 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 AGTR1P30556 359 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MYCNOSP40205 109 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GPR6P46095 362 aaPredicted RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MARCKSL1P49006 195 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 EIF2B2P49770 351 aaKnown RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 AKR1D1P51857 326 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MAXP61244 160 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GNG5P63218 68 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 SELENOWP63302 87 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 TNFAIP6P98066 277 aaPredicted RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 PLCXD2Q0VAA5 305 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 ERCC8Q13216 396 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 BIKQ13323 160 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR8G1Q15617 311 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR8B8Q15620 311 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 LTC4SQ16873 150 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OCIAD2Q56VL3 154 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 STEAP4Q687X5 459 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 TMPPEQ6ZT21 453 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GOLT1AQ6ZVE7 132 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 H2AFVQ71UI9 128 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FA2HQ7L5A8 372 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 STRADAQ7RTN6 431 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 DEFB128Q7Z7B8 93 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MRPL55Q7Z7F7 128 aaKnown RBP1.27□□□□□ -2.21
TRAV40-201ENST00000390467 NAA40Q86UY6 237 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OOSP2Q86WS3 158 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 IFT20Q8IY31 132 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 CBR4Q8N4T8 237 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 FAM24BQ8N5W8 94 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 GPR26Q8NDV2 337 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 SLC30A7Q8NEW0 376 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR4M1Q8NGD0 313 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR4C6Q8NH72 309 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 OR1S1Q8NH92 325 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 MFSD8Q8NHS3 518 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 BLNKQ8WV28 456 aa1.27□□□□□ -2.21
TRAV40-201ENST00000390467 CANT1Q8WVQ1 401 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms