RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 EGR1P18146 543 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 CD40P25942 277 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 OR10J1P30954 320 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 SLC24A4Q8NFF2 622 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
PSME4-201ENST00000389993 TMEM218A2RU14 115 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 DRAM1Q8N682 238 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 PTX4Q96A99 478 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 IGLV3-12A0A075B6K2 115 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 CD1BP29016 333 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 CD81P60033 236 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 ZP1P60852 638 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 TMEM252Q8N6L7 170 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 SNX22Q96L94 193 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 OR1L8Q8NGR8 309 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 DPF1Q92782 380 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 CHRNA10Q9GZZ6 450 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 ZNF581Q9P0T4 197 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 TCAPO15273 167 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
PSME4-201ENST00000389993 TEPPQ6URK8 271 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 OR13A1Q8NGR1 328 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 RHOVQ96L33 236 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 CCL19Q99731 98 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 DHRS9Q9BPW9 319 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 ORM1P02763 201 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 KLRB1Q12918 225 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 CYB561D1Q8N8Q1 229 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
PSME4-201ENST00000389993 OR10S1Q8NGN2 331 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 RNF2Q99496 336 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 GFI1Q99684 422 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 PRNDQ9UKY0 176 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 H3BQ15 152 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
PSME4-201ENST00000389993 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 FAM210BQ96KR6 192 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 PXMP4Q9Y6I8 212 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 C20orf202A1L168 122 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 CEACAM18A8MTB9 384 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 GATCO43716 136 aaKnown RBP12.37□□□□□ -0.43
PSME4-201ENST00000389993 HPRT1P00492 218 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 ZNF660Q6AZW8 331 aaPredicted RBP12.37□□□□□ -0.43
PSME4-201ENST00000389993 MEGF10Q96KG7 1140 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 SFXN3Q9BWM7 321 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 RGS13O14921 159 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 CACNA1DQ01668 2161 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 PF4V1P10720 104 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 ZDHHC8Q9ULC8 765 aa12.37□□□□□ -0.43
PSME4-201ENST00000389993 A0A0B4J293 547 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 H0Y980 276 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 MFNGO00587 321 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 GAPDHP04406 335 aaKnown RBP12.36□□□□□ -0.43
PSME4-201ENST00000389993 IFITM2Q01629 132 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 CCL3L1P16619 93 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 WASHC3Q9Y3C0 194 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 ZNF207O43670 478 aaKnown RBP12.36□□□□□ -0.43
PSME4-201ENST00000389993 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 TECRQ9NZ01 308 aaKnown RBP12.36□□□□□ -0.43
PSME4-201ENST00000389993 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 LILRA1O75019 489 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 THYN1Q9P016 225 aa12.36□□□□□ -0.43
PSME4-201ENST00000389993 CACNA1GO43497 2377 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 IGKV3D-15A0A087WSY6 115 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 MSGN1A6NI15 193 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 MOSP00540 346 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 IGKV3-15P01624 115 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 PTGDSP41222 190 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 BSXQ3C1V8 233 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 TMPRSS5Q9H3S3 457 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 PITX3O75364 302 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 CDS2O95674 445 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 PTBP3O95758 552 aaKnown RBP12.35□□□□□ -0.43
PSME4-201ENST00000389993 LOXL3P58215 753 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 TMEM187Q14656 261 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms