RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 HOXC4P09017 264 aaPredicted RBP13.38□□□□□ -0.27
ALK-201ENST00000389048 SELENOHQ8IZQ5 122 aaKnown RBP13.38□□□□□ -0.27
ALK-201ENST00000389048 A0A1B0GV72 72 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 DLL1O00548 723 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 TYMSP04818 313 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 C1orf185Q5T7R7 199 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 UQCR10Q9UDW1 63 aa13.38□□□□□ -0.27
ALK-201ENST00000389048 FAM106CPP0CH98 169 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 C10orf126Q8N4M7 172 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 DSPPQ9NZW4 1301 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 SPAG17Q6Q759 2223 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 A0A0J9YW62 118 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 CFDP00746 253 aaPredicted RBP13.37□□□□□ -0.27
ALK-201ENST00000389048 FOXA3P55318 350 aaPredicted RBP13.37□□□□□ -0.27
ALK-201ENST00000389048 NFAM1Q8NET5 270 aaPredicted RBP13.37□□□□□ -0.27
ALK-201ENST00000389048 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
ALK-201ENST00000389048 NPFFO15130 113 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 GOLT1AQ6ZVE7 132 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 S1PR2O95136 353 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 ATP1A1-AS1Q5TC04 95 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 SLC25A34Q6PIV7 304 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 INO80CQ6PI98 192 aaPredicted RBP13.37□□□□□ -0.27
ALK-201ENST00000389048 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 CALYQ9NYX4 217 aa13.37□□□□□ -0.27
ALK-201ENST00000389048 TRAV12-3A0A0B4J271 114 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 CEACAM21Q3KPI0 293 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
ALK-201ENST00000389048 QTRT1Q9BXR0 403 aaKnown RBP13.36□□□□□ -0.27
ALK-201ENST00000389048 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
ALK-201ENST00000389048 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 WFDC6Q9BQY6 131 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 LINC00596Q86U02 117 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 CD160O95971 181 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 CBLN1P23435 193 aa13.36□□□□□ -0.27
ALK-201ENST00000389048 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
ALK-201ENST00000389048 ZNF660Q6AZW8 331 aaPredicted RBP13.36□□□□□ -0.27
ALK-201ENST00000389048 LOC101059948A0A1B0GTJ6 334 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 TRGC1P0CF51 173 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 ZNF324BQ6AW86 544 aaPredicted RBP13.35□□□□□ -0.27
ALK-201ENST00000389048 TAF15Q92804 592 aaKnown RBP eCLIP13.35□□□□□ -0.27
ALK-201ENST00000389048 IMMP2LQ96T52 175 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 TRBV20OR9-2A0A075B6H5 130 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 P2RY4P51582 365 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 HIST1H1AQ02539 215 aaPredicted RBP13.35□□□□□ -0.27
ALK-201ENST00000389048 CLEC2AQ6UVW9 174 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
ALK-201ENST00000389048 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 RRHO14718 337 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 NDUFA3O95167 84 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 FOLR2P14207 255 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 AGAP20933 346 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 ZNF345Q14585 488 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 PCM1Q15154 2024 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 H0Y980 276 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 NKX2-8O15522 239 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 IL4P05112 153 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 SPRED2Q7Z698 418 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 A0A1W2PRX2 142 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 MEF2BQ02080 365 aaPredicted RBP13.35□□□□□ -0.27
ALK-201ENST00000389048 IRF3Q14653 427 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 Q5BKY6 102 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
ALK-201ENST00000389048 HTN3P15516 51 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 RND3P61587 244 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 KCNS1Q96KK3 526 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 BTAF1O14981 1849 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 NMBP08949 121 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
ALK-201ENST00000389048 C12orf54Q6X4T0 127 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 ZBTB34Q8NCN2 500 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
ALK-201ENST00000389048 TOMM7Q9P0U1 55 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 DCTN5Q9BTE1 182 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 A0A0B4J293 547 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 M0R381 172 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 DNAL4O96015 105 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 SMIM13P0DJ93 91 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 ATP5G2Q06055 141 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
ALK-201ENST00000389048 LNP1A1A4G5 178 aa13.33□□□□□ -0.27
ALK-201ENST00000389048 SLC17A3O00476 420 aa13.33□□□□□ -0.27
ALK-201ENST00000389048 FGF12P61328 243 aa13.33□□□□□ -0.27
ALK-201ENST00000389048 LILRA6Q6PI73 481 aa13.33□□□□□ -0.27
ALK-201ENST00000389048 ZNF430Q9H8G1 570 aaPredicted RBP13.33□□□□□ -0.27
ALK-201ENST00000389048 SF3B6Q9Y3B4 125 aaKnown RBP13.33□□□□□ -0.27
ALK-201ENST00000389048 FOXS1O43638 330 aa13.33□□□□□ -0.28
ALK-201ENST00000389048 ZFP36L2P47974 494 aaKnown RBP13.33□□□□□ -0.28
ALK-201ENST00000389048 RIPPLY3P57055 190 aa13.33□□□□□ -0.28
ALK-201ENST00000389048 TMEM45BQ96B21 275 aa13.33□□□□□ -0.28
ALK-201ENST00000389048 ATG2BQ96BY7 2078 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms