RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SPINT3P49223 89 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 TTPAP49638 278 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 PSMB3P49720 205 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CLDN18P56856 261 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 RBM11P57052 281 aaKnown RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 RAB38P57729 211 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 AP1S1P61966 158 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 DYNLL1P63167 89 aaKnown RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 UBE2IP63279 158 aaKnown RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LCN2P80188 198 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 QRFPP83859 136 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 AKR1C1Q04828 323 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LRRC74AQ0VAA2 488 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 STX4Q12846 297 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 MIAQ16674 131 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 TBC1D28Q2M2D7 210 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 Q5BKY6 102 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 SPANXN2Q5MJ10 180 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 FAM27BQ5VT28 67 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 PLCXD3Q63HM9 321 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LINC00575Q6W349 94 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 DOLPP1Q86YN1 238 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM156Q8N614 296 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 DAND5Q8N907 189 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 OR1M1Q8NGA1 313 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 OR13C8Q8NGS7 320 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 OR13C9Q8NGT0 318 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 OR11L1Q8NGX0 322 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF675Q8TD23 568 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LRRC39Q96DD0 335 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CENPNQ96H22 339 aaPredicted RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ABHD14BQ96IU4 210 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 PRSS27Q9BQR3 290 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CRACR2AQ9BSW2 395 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 YIPF3Q9GZM5 350 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CHST6Q9GZX3 395 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 MED28Q9H204 178 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 ACOT13Q9NPJ3 140 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 LZTFL1Q9NQ48 299 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 COX16Q9P0S2 106 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 NAT8Q9UHE5 227 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 RBM7Q9Y580 266 aaKnown RBP-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 KIF24Q5T7B8 1368 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 COL4A5P29400 1685 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 CASP8AP2Q9UKL3 1982 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 F8P00451 2351 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 SIPA1L1O43166 1804 aa-0.38□□□□□ -2.47
SNORD28-201ENST00000384706 SRRM2Q9UQ35 2752 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 CHD5Q8TDI0 1954 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ADGRB2O60241 1585 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 A0A0J9YW62 118 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 FUOMA2VDF0 154 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 TVP23AA6NH52 213 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 C21orf140B9A014 251 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 H0YC42 278 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 M0R2N4 97 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 RFXANKO14593 260 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 INE1O15225 51 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 CASC3O15234 703 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 SLC22A1O15245 554 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NDUFB2O95178 105 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF682O95780 498 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 DNAL4O96015 105 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 IGLV3-1P01715 115 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 AKR1C4P17516 323 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 IVDP26440 423 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 GRPRP30550 384 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ARR3P36575 388 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NUP62P37198 522 aaPredicted RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 CSKP41240 450 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 DAPP51397 102 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 PSMD4P55036 377 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 RAB14P61106 215 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 GTF2BQ00403 316 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 BAXQ07812 192 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 ZNF846Q147U1 533 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NDUFA5Q16718 116 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 NDUFAF6Q330K2 333 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 SPRNQ5BIV9 151 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 FAM162BQ5T6X4 162 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 RESP18Q5W5W9 173 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 LAMTOR1Q6IAA8 161 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 C10orf99Q6UWK7 81 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 FAM183BPQ6ZVS7 135 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 SLC35D2Q76EJ3 337 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 BZW1Q7L1Q6 419 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 TAS2R42Q7RTR8 314 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 DHFR2Q86XF0 187 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 C10orf67Q8IYJ2 551 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 MICU2Q8IYU8 434 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 RPP25LQ8N5L8 163 aaKnown RBP-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 PACRGLQ8N7B6 248 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM75Q8N9X5 138 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 TET1Q8NFU7 2136 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 OR8G5Q8NG78 346 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 OR2D3Q8NGH3 330 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 OR51L1Q8NGJ5 315 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 OR51H1Q8NH63 302 aa-0.39□□□□□ -2.47
SNORD28-201ENST00000384706 DOK4Q8TEW6 326 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms