RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 V9GY05 133 aa10.08□□□□□ -0.8
RPAIN-202ENST00000381208 TRDCB7Z8K6 153 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 ZNF701M0R085 212 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-202ENST00000381208 PDCD5O14737 125 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 LGALS1P09382 135 aaKnown RBP10.07□□□□□ -0.8
RPAIN-202ENST00000381208 TMEM50BP56557 158 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 GNB1P62873 340 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 NDPQ00604 133 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 PPP1R27Q86WC6 154 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 ARHGAP5-AS1Q96IT6 56 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 PRR25Q96S07 402 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 MGLLQ99685 303 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 PECRQ9BY49 303 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 TOLLIPQ9H0E2 274 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 KCNK15Q9H427 330 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 OR1A1Q9P1Q5 309 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 METTL1Q9UBP6 276 aaKnown RBP10.07□□□□□ -0.8
RPAIN-202ENST00000381208 GAB2Q9UQC2 676 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 U3KQK5 164 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
RPAIN-202ENST00000381208 CCDC160A6NGH7 325 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 H3BUA1 57 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 LY86O95711 162 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 SCTP09683 121 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 CD3GP09693 182 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 GADD45AP24522 165 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 LGALS7P47929 136 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
RPAIN-202ENST00000381208 RPS25P62851 125 aaKnown RBP10.06□□□□□ -0.8
RPAIN-202ENST00000381208 CBX3Q13185 183 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 ARL6IP1Q15041 203 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 PSG5Q15238 335 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 C2orf76Q3KRA6 126 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 ASPHD1Q5U4P2 390 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 GLDNQ6ZMI3 551 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-202ENST00000381208 OR6Q1Q8NGQ2 317 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 DCUN1D4Q92564 292 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 CYYR1Q96J86 154 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 OR5B12Q96R08 314 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 GFI1Q99684 422 aa10.06□□□□□ -0.8
RPAIN-202ENST00000381208 HDHD3Q9BSH5 251 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-202ENST00000381208 RBM38Q9H0Z9 239 aaKnown RBP10.06□□□□□ -0.8
RPAIN-202ENST00000381208 TRAV1-2A0A0B4J238 106 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 A6NJY4 79 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 LDLRAD4O15165 306 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 SAP30O75446 220 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 HSPB1P04792 205 aaKnown RBP10.05□□□□□ -0.8
RPAIN-202ENST00000381208 OR8U9P0C7N5 309 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 MAP2K4P45985 399 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 FABP5Q01469 135 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 TBCEQ15813 527 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-202ENST00000381208 MOGAT2Q3SYC2 334 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 ZNF367Q7RTV3 350 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 ARPC1AQ92747 370 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 RBMXL1Q96E39 390 aaKnown RBP10.05□□□□□ -0.8
RPAIN-202ENST00000381208 PARP12Q9H0J9 701 aaKnown RBP10.05□□□□□ -0.8
RPAIN-202ENST00000381208 RDH8Q9NYR8 311 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 PTTG2Q9NZH5 202 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 RSL24D1Q9UHA3 163 aaKnown RBP10.05□□□□□ -0.8
RPAIN-202ENST00000381208 FBXO7Q9Y3I1 522 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 A3GALT2U3KPV4 340 aa10.05□□□□□ -0.8
RPAIN-202ENST00000381208 hCG_2014768A0A024R1R8 64 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 METTL21EPA6NDL7 271 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 FCN1O00602 326 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 FABP7O15540 132 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 SOX15O60248 233 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
RPAIN-202ENST00000381208 CA2P00918 260 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 RRASP10301 218 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-202ENST00000381208 RAB6AP20340 208 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 GALP22466 123 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 TPPP2P59282 170 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 PITPNAQ00169 270 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 SRSF7Q16629 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
RPAIN-202ENST00000381208 PLAC9Q5JTB6 97 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 LFNGQ8NES3 379 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 OR10J5Q8NHC4 309 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 CABLES2Q9BTV7 478 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 SLC35D1Q9NTN3 355 aa10.04□□□□□ -0.8
RPAIN-202ENST00000381208 TMEM272A0A1B0GTI8 110 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 M0R1X1 148 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 PROP1O75360 226 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 ZP3P21754 424 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 MYL9P24844 172 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 CLDN12P56749 244 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 FXYD3Q14802 87 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 ACSM6Q6P461 480 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
RPAIN-202ENST00000381208 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
RPAIN-202ENST00000381208 ADTRPQ96IZ2 230 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms