RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RPL8P62917 257 aaKnown RBP8.28□□□□□ -1.08
SNX1-202ENST00000380285 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
SNX1-202ENST00000380285 ARRDC1-AS1Q9H2J1 176 aa8.28□□□□□ -1.08
SNX1-202ENST00000380285 A0A1W2PS18 150 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 TMEM14DPA8MWL7 114 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 NDUFA2O43678 99 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 HDHD3Q9BSH5 251 aaPredicted RBP8.27□□□□□ -1.08
SNX1-202ENST00000380285 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 TAF1LQ8IZX4 1826 aa8.27□□□□□ -1.08
SNX1-202ENST00000380285 GCM2O75603 506 aaPredicted RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 LINC00869P0C866 280 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 FGFRL1Q8N441 504 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 CT55Q8WUE5 264 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 NEUROG1Q92886 237 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 HIST1H4GQ99525 98 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 TINAGQ9UJW2 476 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 FOXS1O43638 330 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 C2orf68Q2NKX9 166 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 IGKV1D-16P01601 117 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 COL10A1Q03692 680 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 ZNF146Q15072 292 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 OR4A5Q8NH83 315 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 RARRES2Q99969 163 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 SLC25A10Q9UBX3 287 aaPredicted RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 WNK3Q9BYP7 1800 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 SIGLEC5O15389 551 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 ZNF714Q96N38 554 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 FER1L5A0AVI2 2057 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 C5orf67F2Z3F1 127 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 ARL14EPLP0DKL9 152 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 B4E171 279 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 NPIPB7O75200 414 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 MGPP08493 103 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 HSPE1P61604 102 aaKnown RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 RPL31P62899 125 aaKnown RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 ZCCHC14Q8WYQ9 949 aaKnown RBP8.27□□□□□ -1.09
SNX1-202ENST00000380285 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 CHODLQ9H9P2 273 aa8.27□□□□□ -1.09
SNX1-202ENST00000380285 DPRXA6NFQ7 191 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 HRKO00198 91 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 PPP1CCP36873 323 aaKnown RBP8.26□□□□□ -1.09
SNX1-202ENST00000380285 ZNF137PP52743 207 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 FUT5Q11128 374 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 TMEM92Q6UXU6 159 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 SDHCQ99643 169 aaPredicted RBP8.26□□□□□ -1.09
SNX1-202ENST00000380285 PLA2G2FQ9BZM2 168 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 PILRAQ9UKJ1 303 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 S1PR2O95136 353 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 HBBP68871 147 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 RHOVQ96L33 236 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 OR2J1Q9GZK6 312 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 JPT1Q9UK76 154 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 GREB1LQ9C091 1923 aaPredicted RBP8.26□□□□□ -1.09
SNX1-202ENST00000380285 RBFOX2O43251 390 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNX1-202ENST00000380285 SRIP30626 198 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 WNT5AP41221 380 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 CYP2G1PQ6ZSU1 146 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 RFLNBQ8N5W9 214 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 GATAD1Q8WUU5 269 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 RND1Q92730 232 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 COL9A1P20849 921 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 GPX4P36969 197 aaPredicted RBP8.26□□□□□ -1.09
SNX1-202ENST00000380285 SPINK14Q6IE38 97 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 PSG4Q00888 419 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 Q6AWC8 147 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 Q6ZS52 159 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 ABHD3Q8WU67 409 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 TM2D1Q9BX74 207 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 CLEC5AQ9NY25 188 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 NTN1O95631 604 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 CCL3P10147 92 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 ADIPOQQ15848 244 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 GPR146Q96CH1 333 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 G6PC2Q9NQR9 355 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
SNX1-202ENST00000380285 C1QL1O75973 258 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 ZNF708P17019 499 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 TMEM177Q53S58 311 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 MDP1Q86V88 176 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 METTL26Q96S19 204 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 TMUB1Q9BVT8 246 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 KMT2EQ8IZD2 1858 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 SBF2Q86WG5 1849 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 PIN1P1O15428 100 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 LMX1BO60663 402 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 SOD3P08294 240 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 MPV17P39210 176 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 CXorf66Q5JRM2 361 aaPredicted RBP8.25□□□□□ -1.09
SNX1-202ENST00000380285 LAIR2Q6ISS4 152 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 OR52M1Q8NGK5 317 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 LRRC37AA6NMS7 1700 aa8.25□□□□□ -1.09
SNX1-202ENST00000380285 LOC107984156A0A0G2JMH3 177 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms