RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CXXC4Q9H2H0 198 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 ATRXP46100 2492 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 PSPNO60542 156 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 F2RP25116 425 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 NKX2-1P43699 371 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-202ENST00000379996 PMS2P11Q13670 270 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 Q6ZR03 302 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 PAPOLGQ9BWT3 736 aaKnown RBP6.42□□□□□ -1.38
CDKL5-202ENST00000379996 IL19Q9UHD0 177 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 WIPI2Q9Y4P8 454 aa6.42□□□□□ -1.38
CDKL5-202ENST00000379996 SMG1Q96Q15 3661 aaKnown RBP6.42□□□□□ -1.38
CDKL5-202ENST00000379996 BTBD17A6NE02 478 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 MLNRO43193 412 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 SSSCA1O60232 199 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 OR4A8P0C604 315 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 MDKP21741 143 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 CAMLGP49069 296 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 HERV-K104P61576 105 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 GNG3P63215 75 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ARL16Q0P5N6 197 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF266Q14584 549 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 RBMS3Q6XE24 437 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 MEX3BQ6ZN04 569 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 GPR146Q96CH1 333 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ATP5SQ99766 215 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 OR2W1Q9Y3N9 320 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 KIR2DS1A0A191URI9 304 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 SLC33A1O00400 549 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 RHBDL1O75783 438 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 HSPB1P04792 205 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 DAOP14920 347 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 KIR2DS4P43632 304 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 BRWD1-AS2P59051 145 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 SNRPEP62304 92 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 KIR2DS1Q14954 304 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 FAM90A2PQ658T7 463 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 OR2T2Q6IF00 324 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 CENPVQ7Z7K6 275 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 FAM90A1Q86YD7 464 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF573Q86YE8 665 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 MKXQ8IYA7 352 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 LSM10Q969L4 123 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ISOC2Q96AB3 205 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF488Q96MN9 340 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 RIMS4Q9H426 269 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 A0A1B0GU03 582 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 A0A1W2PPE2 198 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 DEGS1O15121 323 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 TIMM8AO60220 97 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 CTXN2P0C2S0 81 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 RPL35P42766 123 aaKnown RBP6.41□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF561Q8N587 486 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 OR5C1Q8NGR4 320 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 OR1A1Q9P1Q5 309 aa6.41□□□□□ -1.38
CDKL5-202ENST00000379996 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 hCG_1809904A0A1W2PP81 198 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 A0A1W2PR64 198 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 A0A1W2PRV1 198 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 PRSS47A8MTI9 375 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 TAS2R30P59541 319 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF616Q08AN1 781 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF154Q13106 437 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 ZNF146Q15072 292 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 ELOBQ15370 118 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 Q8IYB0 196 aa6.4□□□□□ -1.38
CDKL5-202ENST00000379996 PMS2P5A8MQ11 134 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 C17orf100A8MU93 164 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 J3QT63 122 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 CHST1O43916 411 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.39
CDKL5-202ENST00000379996 TK1P04183 234 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 RUNX1Q01196 453 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 SPATA46Q5T0L3 261 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 C11orf53Q8IXP5 236 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 OR2G3Q8NGZ4 309 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 SPIN2AQ99865 258 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 SPIN2BQ9BPZ2 258 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 RPS10P5Q9NQ39 176 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 CISD1Q9NZ45 108 aaKnown RBP6.4□□□□□ -1.39
CDKL5-202ENST00000379996 FBXO7Q9Y3I1 522 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 WSB1Q9Y6I7 421 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 OVOL3O00110 214 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 LHBP01229 141 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 IGHV1-46P01743 117 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 PSG2P11465 335 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 GNMTQ14749 295 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 ALKBH6Q3KRA9 238 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
CDKL5-202ENST00000379996 LRP11Q86VZ4 500 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF525Q8N782 197 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 Q8N7P7 452 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 FAM213BQ8TBF2 198 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 HIST1H2AAQ96QV6 131 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms