RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TFF1P04155 84 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-203ENST00000378169 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 MRPL30Q8TCC3 161 aaKnown RBP11.22□□□□□ -0.61
NPHP4-203ENST00000378169 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 MFSD2BA6NFX1 497 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 LY6G6FQ5SQ64 297 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 ZNF714Q96N38 554 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 GFRA3O60609 400 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 S100A8P05109 93 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 GNG4P50150 75 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 TCL1AP56279 114 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
NPHP4-203ENST00000378169 MMDQ15546 238 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 MRGPRGQ86SM5 289 aa11.22□□□□□ -0.61
NPHP4-203ENST00000378169 MYPOPQ86VE0 399 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-203ENST00000378169 LYRM2Q9NU23 88 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-203ENST00000378169 ZNF735P0CB33 412 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CEACAM3P40198 252 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 C1orf174Q8IYL3 243 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 RBKSQ9H477 322 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CEACAM1P13688 526 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CTRB1P17538 263 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CCL1P22362 96 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 UCP3P55916 312 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CTRB2Q6GPI1 263 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 TEPPQ6URK8 271 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 GP6Q9HCN6 339 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 SPRR3Q9UBC9 169 aa11.21□□□□□ -0.61
NPHP4-203ENST00000378169 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 PAX5Q02548 391 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.62
NPHP4-203ENST00000378169 SLC24A4Q8NFF2 622 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 OR1L8Q8NGR8 309 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 OR51B2Q9Y5P1 312 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 TRAPPC1Q9Y5R8 145 aa11.21□□□□□ -0.62
NPHP4-203ENST00000378169 HOXD4P09016 255 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-203ENST00000378169 CRYGSP22914 178 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 NRN1LQ496H8 165 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 PCGF1Q9BSM1 259 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 DBX1A6NMT0 343 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 GLRXP35754 106 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TUBD1Q9UJT1 453 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 MRPS18CQ9Y3D5 142 aaKnown RBP11.2□□□□□ -0.62
NPHP4-203ENST00000378169 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 SCGB2A2Q13296 93 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 ABHD12Q8N2K0 398 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 FBLN5Q9UBX5 448 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 C5orf42Q9H799 3197 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 PIEZO1Q92508 2521 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TGOLN2O43493 480 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 MMP9P14780 707 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 SERF2P84101 59 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TIMM23BQ5SRD1 257 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 LINC01560Q8TB33 94 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPHP4-203ENST00000378169 GALNT14Q96FL9 552 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
NPHP4-203ENST00000378169 LRRK1Q38SD2 2015 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 IGHV2OR16-5A0A0B4J2B6 119 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 PQLC2LA1A4F0 135 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 SPP1P10451 314 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 OR5I1Q13606 314 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 ETFRF1Q6IPR1 90 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 FAM89BQ8N5H3 189 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 SFXN3Q9BWM7 321 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 ZNF785A8K8V0 405 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 CAMPP49913 170 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 RNF212Q495C1 297 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
NPHP4-203ENST00000378169 OR4X1Q8NH49 305 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms