RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 SLC38A11Q08AI6 406 aa15.97■□□□□ 0.15
PCDHA4-201ENST00000378125 GFRALQ6UXV0 394 aa15.97■□□□□ 0.15
PCDHA4-201ENST00000378125 RPRMQ9NS64 109 aa15.97■□□□□ 0.15
PCDHA4-201ENST00000378125 PUS1Q9Y606 427 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCDHA4-201ENST00000378125 TDGF1P3P51864 188 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 FGF8P55075 233 aaPredicted RBP15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 LCN15Q6UWW0 184 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 SPACA3Q8IXA5 215 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 PPP1R35Q8TAP8 253 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 ISOC2Q96AB3 205 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 SCNM1Q9BWG6 230 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 COA4Q9NYJ1 87 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 NDRG3Q9UGV2 375 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 MLXQ9UH92 298 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 CUL9Q8IWT3 2517 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 C7orf77A4D0Y5 90 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 MARCH11A6NNE9 402 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 M0R1X1 148 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 CLDN14O95500 239 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 CFHR2P36980 270 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 CCL8P80075 99 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 TLE4Q04727 773 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 SSX7Q7RTT5 188 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 FAM90A1Q86YD7 464 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 CCL13Q99616 98 aa15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 HSD17B10Q99714 261 aaKnown RBP15.96■□□□□ 0.15
PCDHA4-201ENST00000378125 GYPAP02724 150 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 DUTP33316 252 aaKnown RBP15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 LOXL3P58215 753 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 TRAT1Q6PIZ9 186 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 ZNF66Q6ZN08 573 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 C1orf229Q6ZS94 237 aaPredicted RBP15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 ZFP82Q8N141 532 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 DTD1Q8TEA8 209 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 SNRNP40Q96DI7 357 aaKnown RBP15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 C14orf79Q96F83 325 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 CALYQ9NYX4 217 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 RNF7Q9UBF6 113 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 CEBPZOSA8MTT3 80 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 LRRC75BQ2VPJ9 315 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 FAM122CQ6P4D5 195 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 EDARADDQ8WWZ3 215 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 R3HDM4Q96D70 268 aa15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 QTRT1Q9BXR0 403 aaKnown RBP15.95■□□□□ 0.14
PCDHA4-201ENST00000378125 FAM90A26D6RGX4 464 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 OR9G9P0C7N8 305 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 RPS23P62266 143 aaKnown RBP15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 SOHLH1Q5JUK2 328 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 RAI1Q7Z5J4 1906 aaPredicted RBP15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 FAM216BQ8N7L0 139 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 WDR61Q9GZS3 305 aaKnown RBP15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 C16orf97H3BN30 126 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 CRYBA1P05813 215 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 ZNF726P1Q15940 193 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 TMEM14EPQ6UXP3 125 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 SAV1Q9H4B6 383 aaPredicted RBP15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 KIAA1456Q9P272 454 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 GNG13Q9P2W3 67 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 JPT1Q9UK76 154 aa15.94■□□□□ 0.14
PCDHA4-201ENST00000378125 RELNP78509 3460 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 RAB29O14966 203 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 ICAM4Q14773 271 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 C3orf36Q3SXR2 165 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 C2CD4CQ8TF44 421 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 SMCO4Q9NRQ5 59 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 DPRXA6NFQ7 191 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 ZFP92A6NM28 416 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 COLCA2A8K830 154 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 ARG1P05089 322 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 ERVFRD-1P60508 538 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 PAX5Q02548 391 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 TBR1Q16650 682 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 C17orf58Q2M2W7 97 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 TMEM108Q6UXF1 575 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 IFI27L2Q9H2X8 130 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 IL19Q9UHD0 177 aa15.93■□□□□ 0.14
PCDHA4-201ENST00000378125 HMGB3O15347 200 aaKnown RBP15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 YPEL1O60688 119 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 SCAF4O95104 1147 aaKnown RBP15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 BSPH1Q075Z2 132 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 ADAM5Q6NVV9 412 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 MRGPRGQ86SM5 289 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 CYB561D1Q8N8Q1 229 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 CLDND2Q8NHS1 167 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 Q8TCH9 128 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 TAF15Q92804 592 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 YPEL2Q96QA6 119 aa15.92■□□□□ 0.14
PCDHA4-201ENST00000378125 IFNA17P01571 189 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 SRP19P09132 144 aaKnown RBP15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 CTRB1P17538 263 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 GNG10P50151 68 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 SP5Q6BEB4 398 aaPredicted RBP15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 CTRB2Q6GPI1 263 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 ZNF665Q9H7R5 613 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 DYSFO75923 2080 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 A0A1B0GW64 132 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 THBDP07204 575 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 OR4A8P0C604 315 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 FAM87AP0C7U9 286 aa15.91■□□□□ 0.14
PCDHA4-201ENST00000378125 GATA4P43694 442 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms