RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SFTA2Q6UW10 78 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 ESDP10768 282 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 OTX2P32243 289 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 RPS16P62249 146 aaKnown RBP4.21□□□□□ -1.74
PCDH9-201ENST00000377861 LYPD6Q86Y78 171 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 KNTC1P50748 2209 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 SCN4AP35499 1836 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 SMIM17P0DL12 118 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 GPR146Q96CH1 333 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 CNIH1O95406 144 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 CXorf66Q5JRM2 361 aaPredicted RBP4.21□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF600Q6ZNG1 722 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 ERVFRD-1P60508 538 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 UNC119Q13432 240 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 RDH5Q92781 318 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 RALYQ9UKM9 306 aaKnown RBP4.21□□□□□ -1.74
PCDH9-201ENST00000377861 PDE4DIPQ5VU43 2346 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 DIRC3C9JPN6 131 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
PCDH9-201ENST00000377861 MEX3DQ86XN8 651 aaKnown RBP4.21□□□□□ -1.74
PCDH9-201ENST00000377861 RELBQ01201 579 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 MYH15Q9Y2K3 1946 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 A0A1B0GUT8 65 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 MARCH11A6NNE9 402 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 OR9G1Q8NH87 305 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 PEBP1P30086 187 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 TMEM14EPQ6UXP3 125 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 IGLV3-1P01715 115 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 PSG5Q15238 335 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF774Q6NX45 483 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 RPL30P62888 115 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 BARX1Q9HBU1 254 aaPredicted RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FOXA2Q9Y261 457 aaPredicted RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 DOK4Q8TEW6 326 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FUT9Q9Y231 359 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 Q5BKY6 102 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 C1QL3Q5VWW1 255 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 GAGE10A6NGK3 116 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 SLC16A13Q7RTY0 426 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 VOPP1Q96AW1 172 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 CSRP1P21291 193 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 TAL2Q16559 108 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 GVQW1Q8N7I0 195 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 WNT9BO14905 357 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 EFNB2P52799 333 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 HES4Q9HCC6 221 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 GOLGA4Q13439 2230 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 SPATA12Q7Z6I5 190 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 ZNF488Q96MN9 340 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 BIVMQ86UB2 503 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 SLC25A45Q8N413 288 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 C8orf46Q8TAG6 207 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 AMY1AP04745 511 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FHL1Q13642 323 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 C2orf83Q53S99 150 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FAM78BQ5VT40 261 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FAM122AQ96E09 287 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FOXN4Q96NZ1 517 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 LIPGQ9Y5X9 500 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 DLEC1Q9Y238 1755 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 A0A0U1RQS6 177 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 A0A1W2PQM1 296 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 SPINT1O43278 529 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 PAGE4O60829 102 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 ADRA2AP08913 450 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 B4GALT1P15291 398 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 NRSN2Q9GZP1 204 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 RPL31P62899 125 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 B9A039 149 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 NBEAP1P0C6P0 100 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 OR2B11Q5JQS5 317 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 MYO18AQ92614 2054 aaKnown RBP4.2□□□□□ -1.74
PCDH9-201ENST00000377861 MFAP2P55001 183 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 CLDN18P56856 261 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 NPCDR1Q9BY65 106 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 OTORQ9NRC9 128 aa4.2□□□□□ -1.74
PCDH9-201ENST00000377861 FABP6P51161 128 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 RASL11BQ9BPW5 248 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 KLHDC2Q9Y2U9 406 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 TRAV34A0A0B4J273 112 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 SUPT4H1P63272 117 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 HIST1H1AQ02539 215 aaPredicted RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 PILRBQ9UKJ0 227 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 IGFL3Q6UXB1 125 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 IL17RELQ6ZVW7 336 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 COL24A1Q17RW2 1714 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 DLEU1O43261 78 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 TRGC1P0CF51 173 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 Q6ZN92 141 aa4.19□□□□□ -1.74
PCDH9-201ENST00000377861 ADAD2Q8NCV1 583 aaKnown RBP4.19□□□□□ -1.74
PCDH9-201ENST00000377861 RIPPLY3P57055 190 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms