RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RARRES2Q99969 163 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 TLN1Q9Y490 2541 aaKnown RBP16.79■□□□□ 0.28
VSX1-202ENST00000376709 RAB29O14966 203 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 CYB5R3P00387 301 aaPredicted RBP16.79■□□□□ 0.28
VSX1-202ENST00000376709 IGHV3-7P01780 117 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 SELLP14151 372 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 RAB2AP61019 212 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 CALYQ9NYX4 217 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 CLN8Q9UBY8 286 aa16.79■□□□□ 0.28
VSX1-202ENST00000376709 RBFOX3A6NFN3 312 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 PTAFRP25105 342 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 DUTP33316 252 aaKnown RBP16.78■□□□□ 0.28
VSX1-202ENST00000376709 FLI1Q01543 452 aaPredicted RBP16.78■□□□□ 0.28
VSX1-202ENST00000376709 SLC38A11Q08AI6 406 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 F2RL2O00254 374 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 OR13C7P0DN81 318 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 LOXL3P58215 753 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 AWAT1Q58HT5 328 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 NCR3LG1Q68D85 454 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 FAM222BQ8WU58 562 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 FAM216AQ8WUB2 273 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 SMDT1Q9H4I9 107 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 MLXQ9UH92 298 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 RAXQ9Y2V3 346 aa16.78■□□□□ 0.28
VSX1-202ENST00000376709 ZZEF1O43149 2961 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 FCGR3BO75015 233 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 HBE1P02100 147 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 LRRC75BQ2VPJ9 315 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 TMEM14EPQ6UXP3 125 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 RXFP4Q8TDU9 374 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 DTD1Q8TEA8 209 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 C20orf24Q9BUV8 137 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 FAM234AQ9H0X4 552 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 SPTBN4Q9H254 2564 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 DOCK11Q5JSL3 2073 aa16.77■□□□□ 0.28
VSX1-202ENST00000376709 UBE2L5PA0A1B0GUS4 154 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 M0R036 132 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 M0R1X1 148 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 IRF2P14316 349 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 TMPRSS3P57727 454 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 HAGHQ16775 308 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 R3HDM4Q96D70 268 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 OR4C12Q96R67 309 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 PSMG3Q9BT73 122 aaPredicted RBP16.77■□□□□ 0.27
VSX1-202ENST00000376709 RAB9BQ9NP90 201 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 RPS10P5Q9NQ39 176 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 ZNF835Q9Y2P0 537 aa16.77■□□□□ 0.27
VSX1-202ENST00000376709 RAI1Q7Z5J4 1906 aaPredicted RBP16.77■□□□□ 0.27
VSX1-202ENST00000376709 PCNX1Q96RV3 2341 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 ZG16O60844 167 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 PROP1O75360 226 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 ZNF134P52741 427 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 STUMQ69YW2 141 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 ZDHHC16Q969W1 377 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 RBMXL1Q96E39 390 aaKnown RBP16.76■□□□□ 0.27
VSX1-202ENST00000376709 SDSLQ96GA7 329 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 AIFM2Q9BRQ8 373 aa16.76■□□□□ 0.27
VSX1-202ENST00000376709 WDR61Q9GZS3 305 aaKnown RBP16.76■□□□□ 0.27
VSX1-202ENST00000376709 TSPAN9O75954 239 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
VSX1-202ENST00000376709 RPL39P5Q59GN2 51 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 DUX4L9Q6RFH8 374 aaPredicted RBP16.75■□□□□ 0.27
VSX1-202ENST00000376709 CIB3Q96Q77 187 aaPredicted RBP16.75■□□□□ 0.27
VSX1-202ENST00000376709 DYSFO75923 2080 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 DSCAML1Q8TD84 2053 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 TANC2Q9HCD6 1990 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 TRGV10A0A0A0MS01 117 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 CEBPZOSA8MTT3 80 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 PPIHO43447 177 aaKnown RBP16.75■□□□□ 0.27
VSX1-202ENST00000376709 OR8U8P0C7N1 319 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 CCL8P80075 99 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 BSPH1Q075Z2 132 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 SOHLH1Q5JUK2 328 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 CLCC1Q96S66 551 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 IFI27L2Q9H2X8 130 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 SMCO4Q9NRQ5 59 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 RPRMQ9NS64 109 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 PRELID3BQ9Y3B1 194 aa16.75■□□□□ 0.27
VSX1-202ENST00000376709 DPRXA6NFQ7 191 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 HPRT1P00492 218 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 GYPAP02724 150 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 SERF2P84101 59 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 C17orf58Q2M2W7 97 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 SPINK9Q5DT21 86 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 ADGRG4Q8IZF6 3080 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 Q8TCH9 128 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 LEAP2Q969E1 77 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 CCL13Q99616 98 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 HIPK2Q9H2X6 1198 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 NCOR1P1Q9H4R4 102 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 PRELID1Q9Y255 219 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 KALRNO60229 2985 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 KBTBD11-OT1A0A1B0GTJ5 212 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 OR4A8P0C604 315 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 TAF15Q92804 592 aaKnown RBP eCLIP16.74■□□□□ 0.27
VSX1-202ENST00000376709 GAFA1Q96PS6 74 aa16.74■□□□□ 0.27
VSX1-202ENST00000376709 PARD6GQ9BYG4 376 aaPredicted RBP16.74■□□□□ 0.27
VSX1-202ENST00000376709 VSIRQ9H7M9 311 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms