RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TM4SF4P48230 202 aa10.14□□□□□ -0.79
VPS13A-205ENST00000376636 CTAG1AP78358 180 aa10.14□□□□□ -0.79
VPS13A-205ENST00000376636 VKORC1L1Q8N0U8 176 aa10.14□□□□□ -0.79
VPS13A-205ENST00000376636 MS4A7Q9GZW8 240 aaPredicted RBP10.14□□□□□ -0.79
VPS13A-205ENST00000376636 A0A1B0GW15 77 aa10.14□□□□□ -0.79
VPS13A-205ENST00000376636 MVDP53602 400 aa10.14□□□□□ -0.79
VPS13A-205ENST00000376636 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
VPS13A-205ENST00000376636 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 MEX3AA1L020 520 aaKnown RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 CGB1A6NKQ9 187 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 CEACAM4O75871 244 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 CCL7P80098 99 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 PAX2Q02962 417 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 DNAJC4Q9NNZ3 241 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 LRRC61Q9BV99 259 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 MRM2Q9UI43 246 aaKnown RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 APOMO95445 188 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 GLIPR1P48060 266 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 EML2O95834 649 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 PIGYQ3MUY2 71 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 MRPL24Q96A35 216 aaKnown RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 ALX4Q9H161 411 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 FAM90A26D6RGX4 464 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 RCC1P18754 421 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 SHISA5Q8N114 240 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 G6PC2Q9NQR9 355 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 ELOVL5Q9NYP7 299 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 PRKNO60260 465 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 ZNF688P0C7X2 276 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 PLAUP00749 431 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 STARD6P59095 220 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 DMKNQ6E0U4 476 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-205ENST00000376636 WFDC5Q8TCV5 224 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 GMLQ99445 158 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 TMEM222Q9H0R3 208 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 SOCS1O15524 211 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 ATOH7Q8N100 152 aa10.13□□□□□ -0.79
VPS13A-205ENST00000376636 J3QT63 122 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 RBBP6Q7Z6E9 1792 aaKnown RBP10.12□□□□□ -0.79
VPS13A-205ENST00000376636 CRPP02741 224 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 CYB5R2Q6BCY4 276 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 BIVMQ86UB2 503 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 OR51G1Q8NGK1 321 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
VPS13A-205ENST00000376636 SHISA4Q96DD7 197 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 OR2H1Q9GZK4 316 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 VAX1Q5SQQ9 334 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 ABCA7Q8IZY2 2146 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 SPEM1Q8N4L4 309 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 VSTM2LQ96N03 204 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 ASPDHA6ND91 283 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 SHISA8B8ZZ34 492 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 OGG1O15527 345 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 F12P00748 615 aaPredicted RBP10.12□□□□□ -0.79
VPS13A-205ENST00000376636 PLNP26678 52 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 INO80CQ6PI98 192 aaPredicted RBP10.12□□□□□ -0.79
VPS13A-205ENST00000376636 HOGA1Q86XE5 327 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 ASAH2BP0C7U1 165 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 MMD2Q8IY49 270 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 RTN4RQ9BZR6 473 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 YAE1D1Q9NRH1 226 aa10.12□□□□□ -0.79
VPS13A-205ENST00000376636 RPL27AP46776 148 aaKnown RBP10.12□□□□□ -0.79
VPS13A-205ENST00000376636 IFNL4K9M1U5 179 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 CA7P43166 264 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 LDLRAD1Q5T700 205 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 CLEC2AQ6UVW9 174 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 PRR13Q9NZ81 148 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 ASB1Q9Y576 335 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 Q6AWC8 147 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 AMER3Q8N944 861 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 SLC6A13Q9NSD5 602 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 TMEM30AQ9NV96 361 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 PLA2G3Q9NZ20 509 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 C5orf30Q96GV9 206 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 FLRT3Q9NZU0 649 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 SLC25A15Q9Y619 301 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 ZNF562Q6V9R5 426 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 DUX5Q96PT3 197 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 hCG_38984A0A1B0GV85 526 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 ZNF250P15622 560 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 SSTR5P35346 364 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 CCL4L1Q8NHW4 92 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 SF3B6Q9Y3B4 125 aaKnown RBP10.11□□□□□ -0.79
VPS13A-205ENST00000376636 IGHV3-21A0A0B4J1V1 117 aa10.11□□□□□ -0.79
VPS13A-205ENST00000376636 LCN2P80188 198 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms