RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 M0R1X1 148 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 CASQ2O14958 399 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-202ENST00000376610 SERPINB10P48595 397 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 VEGFCP49767 419 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 MOGAT2Q3SYC2 334 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 ZNF383Q8NA42 475 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-202ENST00000376610 ARHGAP5-AS1Q96IT6 56 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 SLC35D1Q9NTN3 355 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 RDH8Q9NYR8 311 aa14.21□□□□□ -0.13
HDAC6-202ENST00000376610 ERICH4A6NGS2 130 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 TRDCB7Z8K6 153 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 LDLRAD4O15165 306 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 HSMCR30P0CW71 290 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 PSMA1P25786 263 aaKnown RBP14.2□□□□□ -0.14
HDAC6-202ENST00000376610 TMEM68Q96MH6 324 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 PECRQ9BY49 303 aa14.2□□□□□ -0.14
HDAC6-202ENST00000376610 AK6Q9Y3D8 172 aaKnown RBP14.2□□□□□ -0.14
HDAC6-202ENST00000376610 IGLV1-51P01701 117 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 CD3GP09693 182 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 LGALS7P47929 136 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 HAPLN4Q86UW8 402 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 OR5T1Q8NG75 326 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 OR4A4PQ8NGN8 299 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 TPRKBQ9Y3C4 175 aa14.19□□□□□ -0.14
HDAC6-202ENST00000376610 ANKRD34BA5PLL1 514 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 FOXI3A8MTJ6 420 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-202ENST00000376610 DENRO43583 198 aaKnown RBP14.18□□□□□ -0.14
HDAC6-202ENST00000376610 PROP1O75360 226 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 IGHV4-30-4P0DP06 118 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 AADACP22760 399 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 PSMD7P51665 324 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 TMEM50BP56557 158 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
HDAC6-202ENST00000376610 FAM3DQ96BQ1 224 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 HARBI1Q96MB7 349 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 CITED4Q96RK1 184 aa14.18□□□□□ -0.14
HDAC6-202ENST00000376610 TNCP24821 2201 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 IGKV1-6A0A0C4DH72 117 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 H0Y980 276 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 BET1O15155 118 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 FABP7O15540 132 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 CALRP27797 417 aaKnown RBP14.17□□□□□ -0.14
HDAC6-202ENST00000376610 CLDN12P56749 244 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 LINC00205P59089 165 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 RPS25P62851 125 aaKnown RBP14.17□□□□□ -0.14
HDAC6-202ENST00000376610 TPBGQ13641 420 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 TATDN3Q17R31 274 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 RTL8BQ17RB0 113 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 OR10J5Q8NHC4 309 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 GFI1Q99684 422 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 TM2D3Q9BRN9 247 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 OR2D2Q9H210 308 aa14.17□□□□□ -0.14
HDAC6-202ENST00000376610 RBM7Q9Y580 266 aaKnown RBP14.17□□□□□ -0.14
HDAC6-202ENST00000376610 SHOXO15266 292 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 IRF3Q14653 427 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 C2orf76Q3KRA6 126 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 TMEM91Q6ZNR0 172 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 OR9G4Q8NGQ1 327 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 ISOC1Q96CN7 298 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 RAB3CQ96E17 227 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 PHB2Q99623 299 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 COA4Q9NYJ1 87 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 V9GY05 133 aa14.16□□□□□ -0.14
HDAC6-202ENST00000376610 TENM2Q9NT68 2774 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 A8MZ25 164 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 RGS10O43665 173 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 RRASP10301 218 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 SNRPBP14678 240 aaKnown RBP14.15□□□□□ -0.14
HDAC6-202ENST00000376610 GADD45AP24522 165 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 MLLT11Q13015 90 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-202ENST00000376610 PLAC9Q5JTB6 97 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 GTSCR1Q86UQ5 136 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 USMG5Q96IX5 58 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 TINAGL1Q9GZM7 467 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-202ENST00000376610 CCDC90BQ9GZT6 254 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 SDHAF2Q9NX18 166 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 PEF1Q9UBV8 284 aaKnown RBP14.15□□□□□ -0.14
HDAC6-202ENST00000376610 RAB22AQ9UL26 194 aa14.15□□□□□ -0.14
HDAC6-202ENST00000376610 RYR2Q92736 4967 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 BRI3O95415 125 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 DIRAS3O95661 229 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 IGLV2-23P01705 113 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 SYNJ2BPP57105 145 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 PJVKQ0ZLH3 352 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 KLF5Q13887 457 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-202ENST00000376610 RPEL1Q2QD12 228 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 Q8N1Y9 231 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 SPATA25Q9BR10 227 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 GINS4Q9BRT9 223 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 CABLES2Q9BTV7 478 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 CENPOQ9BU64 300 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 ACOT13Q9NPJ3 140 aa14.14□□□□□ -0.15
HDAC6-202ENST00000376610 A0A0B4J203 849 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 TMEM272A0A1B0GTI8 110 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 PDCD5O14737 125 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 MPPED1O15442 326 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 FCGR3AP08637 254 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 VMA21Q3ZAQ7 101 aa14.13□□□□□ -0.15
HDAC6-202ENST00000376610 TMEM177Q53S58 311 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms