RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 BRD3OSQ6XYD6 125 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 DRAXINQ8NBI3 349 aaPredicted RBP18.54■□□□□ 0.56
HLA-C-202ENST00000376237 OR51H1Q8NH63 302 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 CD300LFQ8TDQ1 290 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 TCTEX1D2Q8WW35 142 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 NABP2Q9BQ15 211 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 MRPL20Q9BYC9 149 aaKnown RBP18.54■□□□□ 0.56
HLA-C-202ENST00000376237 GPN1Q9HCN4 374 aaPredicted RBP18.54■□□□□ 0.56
HLA-C-202ENST00000376237 FAM212BQ9NTI7 297 aaPredicted RBP18.54■□□□□ 0.56
HLA-C-202ENST00000376237 HILPDAQ9Y5L2 63 aa18.54■□□□□ 0.56
HLA-C-202ENST00000376237 IGHV1-3A0A0C4DH29 117 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 LINC00473A8K010 186 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 H0Y980 276 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 VSIG10L2P0DP72 767 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 HNF1AP20823 631 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 VAMP1P23763 118 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 MC5RP33032 325 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 KIR2DS2P43631 304 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 RPL30P62888 115 aaKnown RBP18.53■□□□□ 0.56
HLA-C-202ENST00000376237 SUPT4H1P63272 117 aaKnown RBP18.53■□□□□ 0.56
HLA-C-202ENST00000376237 PPP1R1AQ13522 171 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 RUSC1-AS1Q66K80 236 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 GLDNQ6ZMI3 551 aaPredicted RBP18.53■□□□□ 0.56
HLA-C-202ENST00000376237 OR5AN1Q8NGI8 311 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 GPHA2Q96T91 129 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 BEX2Q9BXY8 128 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 BEX1Q9HBH7 125 aa18.53■□□□□ 0.56
HLA-C-202ENST00000376237 ZANQ9Y493 2812 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 LY6G6DO95868 133 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 HLA-AP01891 365 aaKnown RBP18.52■□□□□ 0.56
HLA-C-202ENST00000376237 DHRS2Q13268 280 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 FAM120AOSQ5T036 256 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 LYG2Q86SG7 212 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 ZNF383Q8NA42 475 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 DDB2Q92466 427 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 AJUBAQ96IF1 538 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 MS4A7Q9GZW8 240 aaPredicted RBP18.52■□□□□ 0.56
HLA-C-202ENST00000376237 FAM96BQ9Y3D0 163 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 CSPG4Q6UVK1 2322 aa18.52■□□□□ 0.56
HLA-C-202ENST00000376237 C9orf170A2RU37 121 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 SFT2D2O95562 160 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 IFNA2P01563 188 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 APOA2P02652 100 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 RRASP10301 218 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 TATDN3Q17R31 274 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 C9orf139Q6ZV77 190 aa18.51■□□□□ 0.55
HLA-C-202ENST00000376237 TEX15Q9BXT5 2789 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 PIGBOS1A0A0B4J2F0 54 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 A0A1W2PPI3 338 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 SNRPGP15A8MWD9 76 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 RBFOX2O43251 390 aaKnown RBP eCLIP18.5■□□□□ 0.55
HLA-C-202ENST00000376237 DUS4LO95620 317 aaKnown RBP18.5■□□□□ 0.55
HLA-C-202ENST00000376237 FBP1P09467 338 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 OR5AC1P0C628 307 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 LINC00205P59089 165 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 HABP2Q14520 560 aaPredicted RBP18.5■□□□□ 0.55
HLA-C-202ENST00000376237 RTL8BQ17RB0 113 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 MOB3BQ86TA1 216 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 SPAG16Q8N0X2 631 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 TP53RKQ96S44 253 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 MEGF9Q9H1U4 602 aa18.5■□□□□ 0.55
HLA-C-202ENST00000376237 ZNF469Q96JG9 3925 aaPredicted RBP18.5■□□□□ 0.55
HLA-C-202ENST00000376237 H0YJW9 148 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 RAB13P51153 203 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 CBX3Q13185 183 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 CLEC9AQ6UXN8 241 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 ZNF431Q8TF32 576 aaPredicted RBP18.49■□□□□ 0.55
HLA-C-202ENST00000376237 GLYATL2Q8WU03 294 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 C17orf50Q8WW18 174 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 SMR3AQ99954 134 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 TMEM222Q9H0R3 208 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 SLC35D1Q9NTN3 355 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 A0A0U1RQK1 487 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 C7orf66A4D0T2 115 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 SERPINE2P07093 398 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 RPA2P15927 270 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 UCP1P25874 307 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 CD1BP29016 333 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 BRS3P32247 399 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 SRPXP78539 464 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 SP6Q3SY56 376 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 DHRS7BQ6IAN0 325 aaPredicted RBP18.49■□□□□ 0.55
HLA-C-202ENST00000376237 Q6ZNX1 250 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 DYNAPQ8N1N2 210 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 WASHC3Q9Y3C0 194 aa18.49■□□□□ 0.55
HLA-C-202ENST00000376237 TIMM23O14925 209 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 CREBL2O60519 120 aaPredicted RBP18.48■□□□□ 0.55
HLA-C-202ENST00000376237 FCGR3BO75015 233 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 SRP14P37108 136 aaKnown RBP18.48■□□□□ 0.55
HLA-C-202ENST00000376237 TMEM187Q14656 261 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 SLC9A3R2Q15599 337 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 PDPNQ86YL7 162 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 OR4S2Q8NH73 311 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 SEC22CQ9BRL7 303 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 ACANP16112 2415 aa18.48■□□□□ 0.55
HLA-C-202ENST00000376237 H7C2Y5 167 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 DYNLT3P51808 116 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 BRWD1-AS2P59051 145 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 LIAT1Q6ZQX7 453 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 COQ8AQ8NI60 647 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms