RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZNF658BQ4V348 819 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-203ENST00000375274 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 SLC25A28Q96A46 364 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-203ENST00000375274 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
PTCH1-203ENST00000375274 WNK2Q9Y3S1 2297 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 H0YIZ8 118 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 BIVMQ86UB2 503 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 DEFB124Q8NES8 71 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 RCC1LQ96I51 464 aaKnown RBP9.9□□□□□ -0.83
PTCH1-203ENST00000375274 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.83
PTCH1-203ENST00000375274 COX5BP10606 129 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 NAT2P11245 290 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 FBLN5Q9UBX5 448 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 MARCH11A6NNE9 402 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
PTCH1-203ENST00000375274 RPL31P62899 125 aaKnown RBP9.89□□□□□ -0.83
PTCH1-203ENST00000375274 PQLC2Q6ZP29 291 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 FAM214BQ7L5A3 538 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 OR8I2Q8N0Y5 310 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 ABCA1O95477 2261 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 FAM157AC9JC47 383 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 SNRPCP09234 159 aaKnown RBP9.89□□□□□ -0.83
PTCH1-203ENST00000375274 ZNF735P0CB33 412 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 UCP1P25874 307 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 CEACAM3P40198 252 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 RIGQ13278 110 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 OR8G5Q8NG78 346 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 DNASE2BQ8WZ79 361 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 NBASA2RRP1 2371 aa9.89□□□□□ -0.83
PTCH1-203ENST00000375274 PRSS1P07477 247 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 SMIM17P0DL12 118 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 VWA1Q6PCB0 445 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 TMEM54Q969K7 222 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 EPOPA6NHQ4 379 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 GNG7O60262 68 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 COX6A1P12074 109 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 CEBPDP49716 269 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-203ENST00000375274 DRAM1Q8N682 238 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 AMMECR1Q9Y4X0 333 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-203ENST00000375274 INSIG2Q9Y5U4 225 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 NPIPB7O75200 414 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 SRP19P09132 144 aaKnown RBP9.88□□□□□ -0.83
PTCH1-203ENST00000375274 ACP1P24666 158 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
PTCH1-203ENST00000375274 PPIHO43447 177 aaKnown RBP9.88□□□□□ -0.83
PTCH1-203ENST00000375274 S1PR2O95136 353 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 REG1BP48304 166 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 ZNF137PP52743 207 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 RASL11BQ9BPW5 248 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 GSN-AS1Q9NRJ2 163 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 DOPEY2Q9Y3R5 2298 aa9.88□□□□□ -0.83
PTCH1-203ENST00000375274 COTL1Q14019 142 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 KCNMB1Q16558 191 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 SAP25Q8TEE9 199 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 SPTAN1Q13813 2472 aaKnown RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 hCG_38984A0A1B0GV85 526 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 ODAMA1E959 279 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 A8MWL6 223 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 F8VVB4 439 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 F8VWA3 439 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 FGF16O43320 207 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 CALHM1Q8IU99 346 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 PAQR4Q8N4S7 273 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 ASCL3Q9NQ33 180 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 CORTO00230 105 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 C1orf174Q8IYL3 243 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 MRPL13Q9BYD1 178 aaKnown RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 CHCHD2Q9Y6H1 151 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 K7N7A8 449 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 LINC00869P0C866 280 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 APELAP0DMC3 54 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 EGR1P18146 543 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 PPOXP50336 477 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 SRSF3P84103 164 aaKnown RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 OR4B1Q8NGF8 309 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 DDA1Q9BW61 102 aa9.87□□□□□ -0.83
PTCH1-203ENST00000375274 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
PTCH1-203ENST00000375274 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 GLRX5Q86SX6 157 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 RTN4RQ9BZR6 473 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
PTCH1-203ENST00000375274 ACACAQ13085 2346 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 IGKV1-9A0A0C4DH69 117 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 ARL14EPLP0DKL9 152 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 SELENOTP62341 195 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 CCL8P80075 99 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 TMEM183AQ8IXX5 376 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 FAM222BQ8WU58 562 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 WFIKKN1Q96NZ8 548 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 TMEM140Q9NV12 185 aa9.86□□□□□ -0.83
PTCH1-203ENST00000375274 HSPB8Q9UJY1 196 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms