RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 COL6A6A6NMZ7 2263 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 RAB19A4D1S5 217 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF705EA8MWA4 302 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TXNL1O43396 289 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NXPH3O95157 252 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 OR2B11Q5JQS5 317 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CCDC28AQ8IWP9 274 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ZNF439Q8NDP4 499 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CCL17Q92583 94 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KAAG1Q9UBP8 84 aa14.86□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TEX46H3BTG2 121 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 FBXO24O75426 580 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 G6PCP35575 357 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KIR2DS2P43631 304 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NCR3LG1Q68D85 454 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 UQCC3Q6UW78 93 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MARC2Q969Z3 335 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 PLA2G2EQ9NZK7 142 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 HSPB7Q9UBY9 170 aa14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 RPUSD1Q9UJJ7 312 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 GCN1Q92616 2671 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB1-201ENST00000374943 HIVEP3Q5T1R4 2406 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 IGHV1-69-2A0A0G2JMI3 117 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SLC31A2O15432 143 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KRASP01116 189 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NDUFB7P17568 137 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 SULT1A1P50225 295 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 BLOC1S1P78537 153 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CT45A1Q5HYN5 189 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 STX12Q86Y82 276 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MUC15Q8N387 334 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CT45A3Q8NHU0 189 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 GAL3ST2Q9H3Q3 398 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 KALRNO60229 2985 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 FAM90A9PA6NNJ1 464 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 M0R1X1 148 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 NDUFA2O43678 99 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MED6O75586 246 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 FCN3O75636 299 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 FSTL3O95633 263 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 HPRT1P00492 218 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 PPOXP50336 477 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 DYNLT3P51808 116 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 ARHGDIBP52566 201 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 TNFRSF9Q07011 255 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 STPG2Q8N412 459 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 OR5C1Q8NGR4 320 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 DDB2Q92466 427 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 LINC00052Q96N35 136 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 PARP11Q9NR21 331 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 MMP26Q9NRE1 261 aa14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQB1-201ENST00000374943 B8ZZF3 427 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 PRB1P04280 392 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 UBE2KP61086 200 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 CLINT1Q14677 625 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 RPL39P5Q59GN2 51 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 PXDC1Q5TGL8 231 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 IL34Q6ZMJ4 242 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 C19orf12Q9NSK7 152 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 PRELID3BQ9Y3B1 194 aa14.83□□□□□ -0.04
HLA-DQB1-201ENST00000374943 MARCH11A6NNE9 402 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 NDUFB3O43676 98 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 CST7O76096 145 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 DANCRP0C864 163 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 RAB5CP51148 216 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 LINC00205P59089 165 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 RPL31P62899 125 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 AARDQ4LEZ3 155 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 LRRC10Q5BKY1 277 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 UTF1Q5T230 341 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 H2BFWTQ7Z2G1 175 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 R3HDM4Q96D70 268 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 ATP5SQ99766 215 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 ZNF251Q9BRH9 671 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 PSENENQ9NZ42 101 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 DOCK11Q5JSL3 2073 aa14.82□□□□□ -0.04
HLA-DQB1-201ENST00000374943 SAA2-SAA4A0A096LPE2 208 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 DFFBO76075 338 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 SAA2P0DJI9 122 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 ZNF273Q14593 569 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 HFEQ30201 348 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 PRAMEF5Q5TYX0 476 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 SLC25A48Q6ZT89 311 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 LYPD6BQ8NI32 183 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 LEAP2Q969E1 77 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 ADTRPQ96IZ2 230 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 TSNAXQ99598 290 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 RBKSQ9H477 322 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 ZG16O60844 167 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 FCGR3BO75015 233 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 MMP23AO75900 390 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 C1QL1O75973 258 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 IGHV3-7P01780 117 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 IAPPP10997 89 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 DAOP14920 347 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 NFYBP25208 207 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 THBS3P49746 956 aa14.81□□□□□ -0.04
HLA-DQB1-201ENST00000374943 BTNL8Q6UX41 500 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms