RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TMEM106BQ9NUM4 274 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 PSENENQ9NZ42 101 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 LAMP3Q9UQV4 416 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 PPIAL4AQ9Y536 164 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 RFNGQ9Y644 331 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 YLPM1P49750 1951 aaKnown RBP16.18■□□□□ 0.18
HDAC1-201ENST00000373548 ZNF729A6NN14 1252 aaPredicted RBP16.17■□□□□ 0.18
HDAC1-201ENST00000373548 SIAH2O43255 324 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 ATP6V0CP27449 155 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 TNFRSF9Q07011 255 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 CT45A1Q5HYN5 189 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 CT45A3Q8NHU0 189 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 NARS2Q96I59 477 aaKnown RBP16.17■□□□□ 0.18
HDAC1-201ENST00000373548 ABHD14AQ9BUJ0 271 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 MS4A5Q9H3V2 200 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 PRORYQ9H606 182 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 HSPB7Q9UBY9 170 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 CACFD1Q9UGQ2 172 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 HCFC1P51610 2035 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 NBASA2RRP1 2371 aa16.17■□□□□ 0.18
HDAC1-201ENST00000373548 TPRP12270 2363 aaKnown RBP16.17■□□□□ 0.18
HDAC1-201ENST00000373548 RAB29O14966 203 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 NDUFB7P17568 137 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 TAS2R30P59541 319 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 UBE2KP61086 200 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 UNQ6494/PRO21346Q6UXR6 183 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 C1orf229Q6ZS94 237 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-201ENST00000373548 LYPD6BQ8NI32 183 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 CD300LFQ8TDQ1 290 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 ATP5SQ99766 215 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 RBKSQ9H477 322 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-201ENST00000373548 IDI2-AS1Q9NZ38 188 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 SLC25A10Q9UBX3 287 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-201ENST00000373548 A0A1W2PPE3 182 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 FCN3O75636 299 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 MMP23AO75900 390 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 C1QL1O75973 258 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 RAB7AP51149 207 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 F2RL1P55085 397 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 LY6DQ14210 128 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 H2BFWTQ7Z2G1 175 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 MS4A7Q9GZW8 240 aaPredicted RBP16.16■□□□□ 0.18
HDAC1-201ENST00000373548 GAB2Q9UQC2 676 aa16.16■□□□□ 0.18
HDAC1-201ENST00000373548 B9A039 149 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 FCGR3BO75015 233 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 NFYBP25208 207 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 FHITP49789 147 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 TMEM182Q6ZP80 229 aaPredicted RBP16.15■□□□□ 0.18
HDAC1-201ENST00000373548 ZNF439Q8NDP4 499 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 hADV38S2A0JD32 116 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 TMEM218A2RU14 115 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 MARCH11A6NNE9 402 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 TNFRSF13BO14836 293 aaPredicted RBP16.15■□□□□ 0.18
HDAC1-201ENST00000373548 APOC3P02656 99 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 METTL15P1P0C7V9 234 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 RAB5CP51148 216 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 HAPLN4Q86UW8 402 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 R3HDM4Q96D70 268 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 TSNAXQ99598 290 aaKnown RBP16.15■□□□□ 0.18
HDAC1-201ENST00000373548 CISD1Q9NZ45 108 aaKnown RBP16.15■□□□□ 0.18
HDAC1-201ENST00000373548 LINC00312Q9Y6C7 94 aa16.15■□□□□ 0.18
HDAC1-201ENST00000373548 COL6A6A6NMZ7 2263 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 DOCK11Q5JSL3 2073 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 CAMLGP49069 296 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 ARL16Q0P5N6 197 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 PRAMEF5Q5TYX0 476 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 OR2G3Q8NGZ4 309 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 TMEM231Q9H6L2 316 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 C19orf12Q9NSK7 152 aa16.14■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF273Q14593 569 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 LYPD2Q6UXB3 125 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 STRAPQ9Y3F4 350 aaKnown RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 ANKHD1Q8IWZ3 2542 aaKnown RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 KALRNO60229 2985 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 SAA2-SAA4A0A096LPE2 208 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 AGPAT2O15120 278 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 RBFOX2O43251 390 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 DFFBO76075 338 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 HPRT1P00492 218 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 PRH1P02810 166 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 SAA2P0DJI9 122 aaPredicted RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 RUNX1Q01196 453 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF616Q08AN1 781 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 TMEM30BQ3MIR4 351 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 SPANXN5Q5MJ07 72 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 CA5BP1Q8WTZ4 195 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 DDB2Q92466 427 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 ZNF251Q9BRH9 671 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 RPUSD1Q9UJJ7 312 aaKnown RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 FAM96BQ9Y3D0 163 aa16.13■□□□□ 0.17
HDAC1-201ENST00000373548 SMG1Q96Q15 3661 aaKnown RBP16.13■□□□□ 0.17
HDAC1-201ENST00000373548 MEF2CQ06413 473 aaPredicted RBP16.12■□□□□ 0.17
HDAC1-201ENST00000373548 GNPNAT1Q96EK6 184 aaPredicted RBP16.12■□□□□ 0.17
HDAC1-201ENST00000373548 ADCYAP1P18509 176 aa16.12■□□□□ 0.17
HDAC1-201ENST00000373548 GNG10P50151 68 aa16.12■□□□□ 0.17
HDAC1-201ENST00000373548 ARHGDIBP52566 201 aa16.12■□□□□ 0.17
HDAC1-201ENST00000373548 RPL31P62899 125 aaKnown RBP16.12■□□□□ 0.17
HDAC1-201ENST00000373548 S1PR3Q99500 378 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms