RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FAM71F2Q6NXP2 309 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 EBLN2Q6P2I7 272 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 SPINK2P20155 84 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 MC5RP33032 325 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 OR6X1Q8NH79 312 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 TOX2Q96NM4 488 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 KLK13Q9UKR3 277 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 MPZL1O95297 269 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 GAPDHP04406 335 aaKnown RBP13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 NPFFO15130 113 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 PLA2G10O15496 165 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 TSC2P49815 1807 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 P2RY6Q15077 328 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 OR4D11Q8NGI4 311 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 FGF14Q92915 247 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 SLC52A3Q9NQ40 469 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 TANC2Q9HCD6 1990 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 CXXC4Q9H2H0 198 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
GTF3C4-201ENST00000372146 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF79Q15937 498 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 CHODLQ9H9P2 273 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 TPTE2P1Q5T6R2 138 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 ASAH2BP0C7U1 165 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 PRSS12P56730 875 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 MED13Q9UHV7 2174 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 FFAR1O14842 300 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 EML2O95834 649 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 CTSVO60911 334 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 ZNF32P17041 273 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 LCN2P80188 198 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 SSC5DA1L4H1 1573 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 NKX2-8O15522 239 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 SARAFQ96BY9 339 aa13.35□□□□□ -0.27
GTF3C4-201ENST00000372146 A0A1W2PP11 408 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 LOXL3P58215 753 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 TNFRSF6BO95407 300 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 MRM2Q9UI43 246 aaKnown RBP13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 C10orf111Q8N326 155 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 H0Y8X5 98 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 HOXA3O43365 443 aaPredicted RBP13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 CNTFRP26992 372 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 OR13H1Q8NG92 308 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 PLXNB1O43157 2135 aa13.34□□□□□ -0.27
GTF3C4-201ENST00000372146 HOXA5P20719 270 aa13.33□□□□□ -0.27
GTF3C4-201ENST00000372146 RND3P61587 244 aa13.33□□□□□ -0.27
GTF3C4-201ENST00000372146 A0A0U1RQV5 110 aa13.33□□□□□ -0.27
GTF3C4-201ENST00000372146 MDP1Q86V88 176 aa13.33□□□□□ -0.27
GTF3C4-201ENST00000372146 TMEM56-RWDD3S4R434 201 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 FGF5P12034 268 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 TFPI2P48307 235 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 SUMO3P55854 103 aaPredicted RBP13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 TUBD1Q9UJT1 453 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 A8MWV9 139 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 LINC00869P0C866 280 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 ZNF585BQ52M93 769 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 VKORC1L1Q8N0U8 176 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 CCL27Q9Y4X3 112 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 CENPWQ5EE01 88 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 TMEM211Q6ICI0 200 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 ASB10Q8WXI3 467 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 PLPP3O14495 311 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 LINC00596Q86U02 117 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 NR2C2APQ86WQ0 139 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 PNKDQ8N490 385 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 S1PR2O95136 353 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 APOHP02749 345 aaPredicted RBP13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 CTLA4P16410 223 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 TXNDC17Q9BRA2 123 aa13.33□□□□□ -0.28
GTF3C4-201ENST00000372146 SAA1P0DJI8 122 aaPredicted RBP13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 OCIAD2Q56VL3 154 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 PAPPA-AS1Q5QFB9 102 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 MUC4Q99102 2169 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 H3BRM9 83 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 PATE1Q8WXA2 126 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 NDUFAF3Q9BU61 184 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 RAB9AP51151 201 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 C1orf122Q6ZSJ8 110 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 EPDR1Q9UM22 224 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 PTPRZ1P23471 2315 aaPredicted RBP13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 ADRA2AP08913 450 aa13.32□□□□□ -0.28
GTF3C4-201ENST00000372146 RPS11P62280 158 aaKnown RBP eCLIP13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 KCNMB1Q16558 191 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 MESTQ5EB52 335 aa13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 SSBP3Q9BWW4 388 aaPredicted RBP13.31□□□□□ -0.28
GTF3C4-201ENST00000372146 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms