RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
LRRC42-202ENST00000371368 OR10J5Q8NHC4 309 aa13.27□□□□□ -0.29
LRRC42-202ENST00000371368 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
LRRC42-202ENST00000371368 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
LRRC42-202ENST00000371368 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 HIST1H1DP16402 221 aaKnown RBP13.26□□□□□ -0.29
LRRC42-202ENST00000371368 CD69Q07108 199 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 ZNF260Q3ZCT1 412 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 VAX1Q5SQQ9 334 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 UNQ5815/PRO19632Q6UWF5 114 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 NR2C2APQ86WQ0 139 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 PDPNQ86YL7 162 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 SPARTQ8N0X7 666 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 CASTOR1Q8WTX7 329 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 MAFIPQ8WZ33 124 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 FLYWCH2Q96CP2 140 aaKnown RBP13.26□□□□□ -0.29
LRRC42-202ENST00000371368 B9D2Q9BPU9 175 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 FAM103A1Q9BTL3 118 aaKnown RBP13.26□□□□□ -0.29
LRRC42-202ENST00000371368 ATG5Q9H1Y0 275 aa13.26□□□□□ -0.29
LRRC42-202ENST00000371368 SMIM30A4D0T7 59 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 SPDEFO95238 335 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 DIRAS3O95661 229 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 CA2P00918 260 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 TALDO1P37837 337 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 ECI1P42126 302 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 ARFRP1Q13795 201 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 ACTBL2Q562R1 376 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 C11orf87Q6NUJ2 197 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
LRRC42-202ENST00000371368 OR2D2Q9H210 308 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 SLC35D1Q9NTN3 355 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 SDHAF2Q9NX18 166 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 DNAH9Q9NYC9 4486 aa13.25□□□□□ -0.29
LRRC42-202ENST00000371368 PSMB9P28065 219 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 FGF9P31371 208 aaPredicted RBP13.24□□□□□ -0.29
LRRC42-202ENST00000371368 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
LRRC42-202ENST00000371368 PYHIN1Q6K0P9 492 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 DCUN1D4Q92564 292 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 MS4A10Q96PG2 267 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 PRR25Q96S07 402 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 YTHDF1Q9BYJ9 559 aaKnown RBP13.24□□□□□ -0.29
LRRC42-202ENST00000371368 Q9H521 79 aa13.24□□□□□ -0.29
LRRC42-202ENST00000371368 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
LRRC42-202ENST00000371368 SLC25A17O43808 307 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
LRRC42-202ENST00000371368 LGALS7P47929 136 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 INSL3P51460 131 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 ARL6IP1Q15041 203 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 CDNFQ49AH0 187 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 Q6ZS49 121 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 BVESQ8NE79 360 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 ARPC1AQ92747 370 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 GINS4Q9BRT9 223 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 CENPOQ9BU64 300 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 TPSG1Q9NRR2 321 aa13.23□□□□□ -0.29
LRRC42-202ENST00000371368 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
LRRC42-202ENST00000371368 LSM4Q9Y4Z0 139 aaKnown RBP13.23□□□□□ -0.29
LRRC42-202ENST00000371368 RBM7Q9Y580 266 aaKnown RBP13.23□□□□□ -0.29
LRRC42-202ENST00000371368 IGKV1D-8A0A087WSZ0 117 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 NOTOA8MTQ0 251 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 LINC01619G3V211 115 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 OVOL1O14753 267 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 ARPC1BO15143 372 aaKnown RBP13.22□□□□□ -0.29
LRRC42-202ENST00000371368 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 CD40LGP29965 261 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
LRRC42-202ENST00000371368 FXYD3Q14802 87 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 TPRA1Q86W33 373 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 C5orf30Q96GV9 206 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRRC42-202ENST00000371368 STUB1Q9UNE7 303 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 SSR3Q9UNL2 185 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
LRRC42-202ENST00000371368 COL7A1Q02388 2944 aa13.22□□□□□ -0.29
LRRC42-202ENST00000371368 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 A0A087WW49 117 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 CNIH1O95406 144 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 CRYGBP07316 175 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 DTYMKP23919 212 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 SLURP1P55000 103 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 TPPP2P59282 170 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 PJVKQ0ZLH3 352 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 TMEM177Q53S58 311 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.29
LRRC42-202ENST00000371368 GRPEL2Q8TAA5 225 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
LRRC42-202ENST00000371368 RHOVQ96L33 236 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 SLA2Q9H6Q3 261 aa13.21□□□□□ -0.29
LRRC42-202ENST00000371368 SRRM4A7MD48 611 aaKnown RBP13.2□□□□□ -0.3
LRRC42-202ENST00000371368 SHOXO15266 292 aa13.2□□□□□ -0.3
LRRC42-202ENST00000371368 TRGV3P03979 118 aa13.2□□□□□ -0.3
LRRC42-202ENST00000371368 HSPB1P04792 205 aaKnown RBP13.2□□□□□ -0.3
LRRC42-202ENST00000371368 RRASP10301 218 aa13.2□□□□□ -0.3
LRRC42-202ENST00000371368 SSBP2P81877 361 aaPredicted RBP13.2□□□□□ -0.3
LRRC42-202ENST00000371368 CBX3Q13185 183 aa13.2□□□□□ -0.3
LRRC42-202ENST00000371368 ZNF429Q86V71 674 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms