RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 HOXA1P49639 335 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-204ENST00000371320 RAB39BQ96DA2 213 aa24.07■■□□□ 1.44
SSBP3-204ENST00000371320 CIB3Q96Q77 187 aaPredicted RBP24.07■■□□□ 1.44
SSBP3-204ENST00000371320 SFXN3Q9BWM7 321 aa24.07■■□□□ 1.44
SSBP3-204ENST00000371320 DIDO1Q9BTC0 2240 aaKnown RBP24.07■■□□□ 1.44
SSBP3-204ENST00000371320 ZNF292O60281 2723 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 CD55P08174 381 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ELLP55199 621 aaPredicted RBP24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ATP6V1FQ16864 119 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 MORN2Q502X0 79 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ZNRF1Q8ND25 227 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ZDHHC16Q969W1 377 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 MARCH11A6NNE9 402 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 CR1LQ2VPA4 569 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 NCR3LG1Q68D85 454 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 SSX7Q7RTT5 188 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ITLN1Q8WWA0 313 aa24.06■■□□□ 1.44
SSBP3-204ENST00000371320 ZFP92A6NM28 416 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 OR2C1O95371 312 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 RAB5AP20339 215 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 DUTP33316 252 aaKnown RBP24.05■■□□□ 1.44
SSBP3-204ENST00000371320 RPL35P42766 123 aaKnown RBP24.05■■□□□ 1.44
SSBP3-204ENST00000371320 FGF8P55075 233 aaPredicted RBP24.05■■□□□ 1.44
SSBP3-204ENST00000371320 RPS23P62266 143 aaKnown RBP24.05■■□□□ 1.44
SSBP3-204ENST00000371320 FAM180AQ6UWF9 173 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 ZNF561Q8N587 486 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 NIPSNAP3BQ9BS92 247 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 ZNF665Q9H7R5 613 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 TIMM9Q9Y5J7 89 aa24.05■■□□□ 1.44
SSBP3-204ENST00000371320 IGLV3-9A0A075B6K5 115 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 CEBPZOSA8MTT3 80 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 LHBP01229 141 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 EDDM3BP56851 147 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 OR10G4Q8NGN3 311 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 R3HDM4Q96D70 268 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 TMEM147Q9BVK8 224 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 MRPL37Q9BZE1 423 aaKnown RBP24.04■■□□□ 1.44
SSBP3-204ENST00000371320 CISD1Q9NZ45 108 aaKnown RBP24.04■■□□□ 1.44
SSBP3-204ENST00000371320 BOD1L1Q8NFC6 3051 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 hCG_1809904A0A1W2PP81 198 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 A0A1W2PR64 198 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 A0A1W2PRV1 198 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 YPEL1O60688 119 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 BCL2P10415 239 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 TAGLN2P37802 199 aaKnown RBP24.04■■□□□ 1.44
SSBP3-204ENST00000371320 OR10P1Q8NGE3 313 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 YPEL2Q96QA6 119 aa24.04■■□□□ 1.44
SSBP3-204ENST00000371320 CEACAM8P31997 349 aaPredicted RBP24.03■■□□□ 1.44
SSBP3-204ENST00000371320 KRTCAP3Q53RY4 240 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 TVP23CQ96ET8 276 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 FCGR3BO75015 233 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 PROP1O75360 226 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 FAM57AQ8TBR7 257 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 FAM216AQ8WUB2 273 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 LRFN3Q9BTN0 628 aa24.03■■□□□ 1.44
SSBP3-204ENST00000371320 PMS2P5A8MQ11 134 aa24.02■■□□□ 1.44
SSBP3-204ENST00000371320 DLK1P80370 383 aa24.02■■□□□ 1.44
SSBP3-204ENST00000371320 FAM27E3Q08E93 113 aa24.02■■□□□ 1.44
SSBP3-204ENST00000371320 HNF4GQ14541 408 aa24.02■■□□□ 1.44
SSBP3-204ENST00000371320 SPINK9Q5DT21 86 aa24.02■■□□□ 1.44
SSBP3-204ENST00000371320 CENPVQ7Z7K6 275 aaPredicted RBP24.02■■□□□ 1.44
SSBP3-204ENST00000371320 CADP27708 2225 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 MAP1LC3B2A6NCE7 125 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 F2RL2O00254 374 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 AGAP20933 346 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 LOXL3P58215 753 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 SELENOVP59797 346 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 MAP1LC3BQ9GZQ8 125 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 M0R1X1 148 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 RAB11AP62491 216 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 OR6C3Q9NZP0 311 aa24.01■■□□□ 1.43
SSBP3-204ENST00000371320 RPS16P62249 146 aaKnown RBP24■■□□□ 1.43
SSBP3-204ENST00000371320 FAM201AQ5SY85 155 aa24■■□□□ 1.43
SSBP3-204ENST00000371320 SLC35E3Q7Z769 313 aa24■■□□□ 1.43
SSBP3-204ENST00000371320 QTRT1Q9BXR0 403 aaKnown RBP24■■□□□ 1.43
SSBP3-204ENST00000371320 SLC39A9Q9NUM3 307 aa24■■□□□ 1.43
SSBP3-204ENST00000371320 CALYQ9NYX4 217 aa24■■□□□ 1.43
SSBP3-204ENST00000371320 A8MXE2 369 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 HPRT1P00492 218 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 IGHV3-7P01780 117 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 BMP5P22003 454 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 GATA4P43694 442 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 A0A087WWC5 75 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 OR9G9P0C7N8 305 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 FGF7P21781 194 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 NBL1P41271 181 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 ADAM5Q6NVV9 412 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 MRGPRGQ86SM5 289 aa23.99■■□□□ 1.43
SSBP3-204ENST00000371320 RPP25LQ8N5L8 163 aaKnown RBP23.99■■□□□ 1.43
SSBP3-204ENST00000371320 ZNF727A8MUV8 499 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 IFNA4P05014 189 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 MAS1LP35410 378 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 ZNF134P52741 427 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 SNRPEP62304 92 aaKnown RBP23.98■■□□□ 1.43
SSBP3-204ENST00000371320 RPL39P5Q59GN2 51 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 FAM234AQ9H0X4 552 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 RNF7Q9UBF6 113 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 ATXN7O15265 892 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-204ENST00000371320 IFNA1P01562 189 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 IGKV1D-33P01593 117 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms