RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CHODLQ9H9P2 273 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 ZC4H2Q9NQZ6 224 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 COA4Q9NYJ1 87 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 ZNRD1Q9P1U0 126 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 CFAP46Q8IYW2 2715 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 USF3Q68DE3 2245 aa14.36□□□□□ -0.11
SSBP3-203ENST00000371319 SPTBN1Q01082 2364 aaKnown RBP14.35□□□□□ -0.11
SSBP3-203ENST00000371319 RBFOX2O43251 390 aaKnown RBP eCLIP14.35□□□□□ -0.113e-6■□□□□ 10.7
SSBP3-203ENST00000371319 FCGR3BO75015 233 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 ATG12O94817 140 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 TMEM50AO95807 157 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 KRASP01116 189 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 KIR2DS2P43631 304 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 PAX9P55771 341 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 ZNF295-AS1Q8N0V1 137 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 OR8B3Q8NGG8 313 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 ZNF596Q8TC21 504 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 OR8B2Q96RD0 313 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 GSX2Q9BZM3 304 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 FBXL17Q9UF56 701 aa14.35□□□□□ -0.11
SSBP3-203ENST00000371319 IGSF23A1L1A6 192 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 FAM24AA6NFZ4 105 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 TAAR5O14804 337 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 CHST1O43916 411 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 NDUFS7O75251 213 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 HPRT1P00492 218 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 F12P00748 615 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-203ENST00000371319 PVALBP20472 110 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-203ENST00000371319 THBS3P49746 956 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 TMEM33P57088 247 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 WDR25Q64LD2 544 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-203ENST00000371319 CLEC9AQ6UXN8 241 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 OR2C3Q8N628 320 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 C8orf31Q8N9H6 132 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 C8orf46Q8TAG6 207 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 LYRM2Q9NU23 88 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-203ENST00000371319 ARID1AO14497 2285 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 A0A087X0M5 115 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 A0A1B0GX30 115 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 LINC00862A6NCI5 91 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 GPR37O15354 613 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 VAMP2P63027 116 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 EWSR1Q01844 656 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■□ 19.3
SSBP3-203ENST00000371319 ZNF833PQ6ZTB9 187 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 R3HDM4Q96D70 268 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 RAB39BQ96DA2 213 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 PHYHIPLQ96FC7 376 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 S1PR3Q99500 378 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 PRELID3BQ9Y3B1 194 aa14.34□□□□□ -0.11
SSBP3-203ENST00000371319 KLF2Q9Y5W3 355 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-203ENST00000371319 WRBO00258 174 aa14.33□□□□□ -0.12
SSBP3-203ENST00000371319 IGHV1-8P0DP01 117 aa14.33□□□□□ -0.12
SSBP3-203ENST00000371319 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
SSBP3-203ENST00000371319 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
SSBP3-203ENST00000371319 SMIM3Q9BZL3 60 aa14.33□□□□□ -0.12
SSBP3-203ENST00000371319 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
SSBP3-203ENST00000371319 WFDC1Q9HC57 220 aa14.33□□□□□ -0.12
SSBP3-203ENST00000371319 SESN1Q9Y6P5 492 aa14.33□□□□□ -0.12
SSBP3-203ENST00000371319 MARCH11A6NNE9 402 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 FAM90A26D6RGX4 464 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 OVOL3O00110 214 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 TOR1AO14656 332 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 NMBP08949 121 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 CT45A6P0DMU7 189 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 CT45A5P0DMU8 189 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 CT45A7P0DMV0 189 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 EFNA4P52798 201 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 RAB14P61106 215 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 NHLH2Q02577 135 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 TLE4Q04727 773 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 H2BFWTQ7Z2G1 175 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 BAP18Q8IXM2 172 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 LY6G5BQ8NDX9 201 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 IGFBPL1Q8WX77 278 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 SPOCK3Q9BQ16 436 aa14.32□□□□□ -0.12
SSBP3-203ENST00000371319 J3QR06 171 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 SYNGR2O43760 224 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 GAPDHP04406 335 aaKnown RBP14.31□□□□□ -0.12
SSBP3-203ENST00000371319 CAV2P51636 162 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 FAM74A1Q5RGS3 127 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 TMEM252Q8N6L7 170 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 OR4S2Q8NH73 311 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 RAB40CQ96S21 281 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-203ENST00000371319 HSPB7Q9UBY9 170 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 AUP1Q9Y679 476 aa14.31□□□□□ -0.12
SSBP3-203ENST00000371319 PPIAL4CA0A0B4J2A2 164 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 C22orf46C9J442 243 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 OR9G9P0C7N8 305 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 PPIAL4GP0DN37 164 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 SRSF1Q07955 248 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSBP3-203ENST00000371319 SLC25A31Q9H0C2 315 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 TMEM133Q9H2Q1 129 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 RBKSQ9H477 322 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 DOCK11Q5JSL3 2073 aa14.3□□□□□ -0.12
SSBP3-203ENST00000371319 IAPPP10997 89 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms