RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CLEC12BQ2HXU8 276 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 DEFB113Q30KQ7 82 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 LRRC75A-AS1Q8N1F1 130 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 BEND2Q8NDZ0 799 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 ST6GALNAC6Q969X2 333 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 TMEM186Q96B77 213 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 KPTNQ9Y664 436 aa19.46■□□□□ 0.71
SNX3-203ENST00000368979 RBFOX2O43251 390 aaKnown RBP eCLIP19.45■□□□□ 0.7
SNX3-203ENST00000368979 PRTN3P24158 256 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 KIR2DS2P43631 304 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 HLA-DRB5Q30154 266 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 LRRC37A5PQ49AS3 106 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 ZNF383Q8NA42 475 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 LSM10Q969L4 123 aaKnown RBP19.45■□□□□ 0.7
SNX3-203ENST00000368979 GSKIPQ9P0R6 139 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 PRELID3BQ9Y3B1 194 aa19.45■□□□□ 0.7
SNX3-203ENST00000368979 A0A0G2JRQ6 117 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 TOR1AO14656 332 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 S1PR2O95136 353 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 IGKV1-5P01602 117 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 SLC25A16P16260 332 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 PSMB6P28072 239 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 PRRX1P54821 245 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 PRB3Q04118 309 aaPredicted RBP19.44■□□□□ 0.7
SNX3-203ENST00000368979 GRPEL2Q8TAA5 225 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 SPIN2AQ99865 258 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 SPIN2BQ9BPZ2 258 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 SIRPDQ9H106 197 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 UNKLQ9H9P5 680 aaKnown RBP19.44■□□□□ 0.7
SNX3-203ENST00000368979 SIRT7Q9NRC8 400 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 MMP26Q9NRE1 261 aa19.44■□□□□ 0.7
SNX3-203ENST00000368979 FCGR3BO75015 233 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 MPC2O95563 127 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 CT45A6P0DMU7 189 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 CT45A5P0DMU8 189 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 CT45A7P0DMV0 189 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 COX7A1P24310 79 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 C11orf87Q6NUJ2 197 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 OR13D1Q8NGV5 346 aa19.43■□□□□ 0.7
SNX3-203ENST00000368979 SLC25A4P12235 298 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 IL3RAP26951 378 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 AKR1C2P52895 323 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 RAB32Q13637 225 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 LAMTOR1Q6IAA8 161 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 HCP5Q6MZN7 132 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 PNKDQ8N490 385 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 C9orf62Q8N4C0 152 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 OR11H6Q8NGC7 330 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 OR4D5Q8NGN0 318 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 GPR146Q96CH1 333 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 PLEKHA2Q9HB19 425 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 PTPN13Q12923 2485 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 CRYBG3Q68DQ2 2970 aa19.42■□□□□ 0.7
SNX3-203ENST00000368979 HPRT1P00492 218 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 P0C879 139 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 SLC25A6P12236 298 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 VMO1Q7Z5L0 202 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 OR4P4Q8NGL7 312 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 MBD6Q96DN6 1003 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 MRPL20Q9BYC9 149 aaKnown RBP19.41■□□□□ 0.7
SNX3-203ENST00000368979 DOPEY2Q9Y3R5 2298 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 FXYD6-FXYD2A0A087WZ82 144 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 HMSDA8MTL9 139 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 ATG12O94817 140 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 DIAPH2-AS1Q14236 149 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 OR4S2Q8NH73 311 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 RNASE11Q8TAA1 199 aaKnown RBP19.41■□□□□ 0.7
SNX3-203ENST00000368979 RRNAD1Q96FB5 475 aaKnown RBP19.41■□□□□ 0.7
SNX3-203ENST00000368979 HEXA-AS1Q9H8Q6 139 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 MMP24Q9Y5R2 645 aa19.41■□□□□ 0.7
SNX3-203ENST00000368979 MAST4O15021 2626 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 A0A1B0GU03 582 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 H0YIZ8 118 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 BUB1B-PAK6H3BSN5 160 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 MMP9P14780 707 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 G6PCP35575 357 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 DVL1P1P54792 670 aaPredicted RBP19.4■□□□□ 0.7
SNX3-203ENST00000368979 THOC7Q6I9Y2 204 aaKnown RBP19.4■□□□□ 0.7
SNX3-203ENST00000368979 FAM219AQ8IW50 185 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 NABP2Q9BQ15 211 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 RNF126Q9BV68 326 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 MBD2Q9UBB5 411 aa19.4■□□□□ 0.7
SNX3-203ENST00000368979 AMMECR1Q9Y4X0 333 aaPredicted RBP19.4■□□□□ 0.7
SNX3-203ENST00000368979 A0A096LNT2 108 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 ODF3BA8MYP8 253 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 PITX3O75364 302 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 LYL1P12980 280 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 THAP6Q8TBB0 222 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 INSIG2Q9Y5U4 225 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 ARHGAP32A7KAX9 2087 aa19.39■□□□□ 0.69
SNX3-203ENST00000368979 KRASP01116 189 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 MBPP02686 304 aaPredicted RBP19.38■□□□□ 0.69
SNX3-203ENST00000368979 EPHA1P21709 976 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 USF1P22415 310 aaPredicted RBP19.38■□□□□ 0.69
SNX3-203ENST00000368979 REG1BP48304 166 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 S100A10P60903 97 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 KLRD1Q13241 179 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 SMCO1Q147U7 214 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 IZUMO4Q1ZYL8 232 aa19.38■□□□□ 0.69
SNX3-203ENST00000368979 PRSS54Q6PEW0 395 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms