RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TBC1D26Q86UD7 250 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 NECAP1Q8NC96 275 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 FLNCQ14315 2725 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 CRYAAP02489 173 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
TPM3-212ENST00000368533 GNG3P63215 75 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 PAX5Q02548 391 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 HERPUD1Q15011 391 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 TMEM211Q6ICI0 200 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 Q6ZPA2 131 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 BEND2Q8NDZ0 799 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 MSI2Q96DH6 328 aaKnown RBP8.97□□□□□ -0.97
TPM3-212ENST00000368533 SFXN3Q9BWM7 321 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 RBM7Q9Y580 266 aaKnown RBP8.97□□□□□ -0.97
TPM3-212ENST00000368533 USF3Q68DE3 2245 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 MED13LQ71F56 2210 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 CCL21O00585 134 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 CST7O76096 145 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 CD55P08174 381 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 RAB4AP20338 218 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 GAPTQ8N292 157 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 RNASE8Q8TDE3 154 aaKnown RBP8.96□□□□□ -0.97
TPM3-212ENST00000368533 PBDC1Q9BVG4 233 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 TMED3Q9Y3Q3 217 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 MYO18BQ8IUG5 2567 aa8.96□□□□□ -0.97
TPM3-212ENST00000368533 TGOLN2O43493 480 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 ADAM20O43506 726 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 IRF2P14316 349 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 LMO1P25800 156 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 UCNP55089 124 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 TGIF2LYQ8IUE0 185 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 TPRX1Q8N7U7 411 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 OR5A2Q8NGI9 324 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 LINC01560Q8TB33 94 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 NEUROG1Q92886 237 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 RBFOX3A6NFN3 312 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 NXPH2O95156 264 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 SCGB1D1O95968 90 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 COL10A1Q03692 680 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 CXorf66Q5JRM2 361 aaPredicted RBP8.96□□□□□ -0.98
TPM3-212ENST00000368533 GPR157Q5UAW9 335 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 SLC25A24Q6NUK1 477 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 ASCL4Q6XD76 172 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 FAM185AQ8N0U4 392 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 OR51H1Q8NH63 302 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 RND1Q92730 232 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 C18orf12Q96KH6 178 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 CCL28Q9NRJ3 127 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 DECR2Q9NUI1 292 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 GAB2Q9UQC2 676 aa8.96□□□□□ -0.98
TPM3-212ENST00000368533 ZNF16P17020 682 aaPredicted RBP8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR3A1P47881 315 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 P2RY1P47900 373 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 UCP3P55916 312 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR5I1Q13606 314 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 PMS2P11Q13670 270 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 IL13RA2Q14627 380 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 ZNF718Q3SXZ3 478 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 TIMM23BQ5SRD1 257 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR2G3Q8NGZ4 309 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR4X1Q8NH49 305 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 R3HDM4Q96D70 268 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 RTL8AQ9BWD3 113 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
TPM3-212ENST00000368533 IGHV3OR15-7A0A075B7D8 119 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 ELLP55199 621 aaPredicted RBP8.95□□□□□ -0.98
TPM3-212ENST00000368533 EWSR1Q01844 656 aaKnown RBP eCLIP8.95□□□□□ -0.98
TPM3-212ENST00000368533 KLRB1Q12918 225 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 MRPL41Q8IXM3 137 aaKnown RBP8.95□□□□□ -0.98
TPM3-212ENST00000368533 CMTM1Q8IZ96 169 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 COMMD1Q8N668 190 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 C1orf162Q8NEQ5 155 aaPredicted RBP8.95□□□□□ -0.98
TPM3-212ENST00000368533 OR51I2Q9H344 312 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 MPC1Q9Y5U8 109 aa8.95□□□□□ -0.98
TPM3-212ENST00000368533 A0A1B0GUS0 222 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 XKRY2A2RUG3 117 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 H3BP45 60 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 DVL1O14640 695 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 IGLV1-44P01699 117 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 RAC2P15153 192 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 RBPJQ06330 500 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 C20orf204Q6ZNR8 217 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 ZNF573Q86YE8 665 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 FAM58AQ8N1B3 248 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 TECTBQ96PL2 329 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 TMEM222Q9H0R3 208 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 IL36GQ9NZH8 169 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 IGKV1D-13A0A0B4J2D9 117 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 TRDCB7Z8K6 153 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 SIAH2O43255 324 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 SEC11BP0C7V7 166 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 IGKV1-13P0DP09 117 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 GLIPR1P48060 266 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 BSPH1Q075Z2 132 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 TDRG1Q3Y452 100 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms