RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 POC5Q8NA72 575 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.28□□□□□ -0.44
CKS1B-202ENST00000368436 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
CKS1B-202ENST00000368436 TM2D3Q9BRN9 247 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 RANGRFQ9HD47 186 aaPredicted RBP12.28□□□□□ -0.44
CKS1B-202ENST00000368436 STUB1Q9UNE7 303 aa12.28□□□□□ -0.44
CKS1B-202ENST00000368436 A8MZ25 164 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 M0R1X1 148 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 LDLRAD4O15165 306 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 ARL6IP5O75915 188 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 IGLV2-23P01705 113 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 SERPINB10P48595 397 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 RPS25P62851 125 aaKnown RBP12.27□□□□□ -0.45
CKS1B-202ENST00000368436 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
CKS1B-202ENST00000368436 C2orf76Q3KRA6 126 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 OR5T1Q8NG75 326 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 GRPEL2Q8TAA5 225 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 VCXQ9H320 206 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 DUSP21Q9H596 190 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 SLC35D1Q9NTN3 355 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 C19orf73Q9NVV2 129 aa12.27□□□□□ -0.45
CKS1B-202ENST00000368436 ZP3P21754 424 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 PSMA1P25786 263 aaKnown RBP12.26□□□□□ -0.45
CKS1B-202ENST00000368436 LGALS7P47929 136 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 CLDN12P56749 244 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 PJVKQ0ZLH3 352 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 KLF5Q13887 457 aaPredicted RBP12.26□□□□□ -0.45
CKS1B-202ENST00000368436 MOGAT2Q3SYC2 334 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 HAPLN4Q86UW8 402 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 FAM3DQ96BQ1 224 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 TPRKBQ9Y3C4 175 aa12.26□□□□□ -0.45
CKS1B-202ENST00000368436 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 C13orf42A0A1B0GVH6 325 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 DENRO43583 198 aaKnown RBP12.25□□□□□ -0.45
CKS1B-202ENST00000368436 CNIH1O95406 144 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 HSMCR30P0CW71 290 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 IGHV4-30-4P0DP06 118 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 RANBP1P43487 201 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 FABP5Q01469 135 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 MLLT11Q13015 90 aaPredicted RBP12.25□□□□□ -0.45
CKS1B-202ENST00000368436 ANKRD13BQ86YJ7 626 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 SDHAF2Q9NX18 166 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 KCNK7Q9Y2U2 307 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 V9GY05 133 aa12.25□□□□□ -0.45
CKS1B-202ENST00000368436 TRBV6-7A0A0A0MS04 114 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 FABP7O15540 132 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 DIRAS3O95661 229 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 LYL1P12980 280 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
CKS1B-202ENST00000368436 PSMD7P51665 324 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
CKS1B-202ENST00000368436 PLA2G7Q13093 441 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 IGSF11Q5DX21 431 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 CABLES2Q9BTV7 478 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
CKS1B-202ENST00000368436 RAB22AQ9UL26 194 aa12.24□□□□□ -0.45
CKS1B-202ENST00000368436 TENM2Q9NT68 2774 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 TMEM272A0A1B0GTI8 110 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 SRRM4A7MD48 611 aaKnown RBP12.23□□□□□ -0.45
CKS1B-202ENST00000368436 RGS10O43665 173 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 FCGR3AP08637 254 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 CD3GP09693 182 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 GSTT2P0CG29 244 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 GSTT2BP0CG30 244 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 AADACP22760 399 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 ZNF343Q6P1L6 599 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 OR9G4Q8NGQ1 327 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 HARBI1Q96MB7 349 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 OR2D2Q9H210 308 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 RYR2Q92736 4967 aa12.23□□□□□ -0.45
CKS1B-202ENST00000368436 SACSQ9NZJ4 4579 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 BET1O15155 118 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 HES5Q5TA89 166 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 BVESQ8NE79 360 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 MGLLQ99685 303 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
CKS1B-202ENST00000368436 PEF1Q9UBV8 284 aaKnown RBP12.22□□□□□ -0.45
CKS1B-202ENST00000368436 NKX1-2Q9UD57 310 aaPredicted RBP12.22□□□□□ -0.45
CKS1B-202ENST00000368436 H0Y980 276 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 MFNGO00587 321 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 SHOXO15266 292 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 RRASP10301 218 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 AQP4P55087 323 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms