RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ACKR4Q9NPB9 350 aa5.43□□□□□ -1.54
ECHDC1-202ENST00000368289 CACFD1Q9UGQ2 172 aa5.43□□□□□ -1.54
ECHDC1-202ENST00000368289 NOSIPQ9Y314 301 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-202ENST00000368289 LSM5Q9Y4Y9 91 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-202ENST00000368289 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 IGKV1-27A0A075B6S5 117 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 A0A087WWC5 75 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 TRAV1-1A0A0B4J248 108 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 C1orf196B1AJZ1 125 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 B4DEV8 164 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 FAM157AC9JC47 383 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 FAM90A26D6RGX4 464 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 H0Y980 276 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 TRAPPC2LH3BP13 241 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 GEMIN2O14893 280 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 DEGS1O15121 323 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 CXCL13O43927 109 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 NEURL1O76050 574 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 PAX1P15863 534 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 MUC1P15941 1255 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 GDF1P27539 372 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 PPIFP30405 207 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 LPAR6P43657 344 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 COMPP49747 757 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 TAS2R30P59541 319 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 VAMP2P63027 116 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 IL24Q13007 206 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 GUK1Q16774 197 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 VWA1Q6PCB0 445 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 MRPL21Q7Z2W9 205 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 NUFIP2Q7Z417 695 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 RNF144BQ7Z419 303 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 ZDHHC23Q8IYP9 409 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 Q8N1X5 172 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 TCTEX1D1Q8N7M0 179 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 ZNF611Q8N823 705 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 NPRL2Q8WTW4 380 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 PIGCQ92535 297 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 LSM10Q969L4 123 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 SIRT7Q9NRC8 400 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 GLRX2Q9NS18 164 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 C19orf12Q9NSK7 152 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 LYRM2Q9NU23 88 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 KIAA1456Q9P272 454 aa5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 UBE2J1Q9Y385 318 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 RAI1Q7Z5J4 1906 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 YLPM1P49750 1951 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-202ENST00000368289 IGKV1D-8A0A087WSZ0 117 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 IGHV3-15A0A0B4J1V0 119 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 IGKV1-12A0A0C4DH73 117 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 LRRC3CA6NJW4 275 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 ANKRD30BLA7E2S9 258 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 COLCA2A8K830 154 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 KLRC4-KLRK1H3BQV0 150 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 K7N7A8 449 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 TRAPPC6AO75865 159 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 OR7C1O76099 320 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 FSHBP01225 129 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 IGKV1D-12P01611 117 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 PRH1P02810 166 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 HSPB1P04792 205 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 B4GALT1P15291 398 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 SELEP16581 610 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 PTAFRP25105 342 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 GNRHRP30968 328 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 CD80P33681 288 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 RPL23AP62750 156 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 GNG3P63215 75 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 SERF2P84101 59 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 PNRC1Q12796 327 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 OR2A2Q6IF42 318 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 ZNF880Q6PDB4 577 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 YRDCQ86U90 279 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 STX12Q86Y82 276 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 BHLHE23Q8NDY6 225 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 TOMM40LQ969M1 308 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 PSMG3Q9BT73 122 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 C11orf1Q9H5F2 150 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 TMEM242Q9NWH2 141 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 POLDIP2Q9Y2S7 368 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 KLF13Q9Y2Y9 288 aaPredicted RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 WSB1Q9Y6I7 421 aa5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-202ENST00000368289 WRBO00258 174 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 NUPL2O15504 423 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 ANGPTL7O43827 346 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 IFNA5P01569 189 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 IFNA17P01571 189 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 S100A6P06703 90 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 SP1P08047 785 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 OR8U9P0C7N5 309 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 SMIM6P0DI80 62 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 PRKACAP17612 351 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 AADACP22760 399 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 LOXP28300 417 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 OPRM1P35372 400 aa5.4□□□□□ -1.54
ECHDC1-202ENST00000368289 NPBWR2P48146 333 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms