RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 H1FOOQ8IZA3 346 aaPredicted RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 HSD17B11Q8NBQ5 300 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 DEFB108BQ8NET1 73 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
USF1-203ENST00000368021 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
USF1-203ENST00000368021 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.8
USF1-203ENST00000368021 RAI1Q7Z5J4 1906 aaPredicted RBP10.02□□□□□ -0.8
USF1-203ENST00000368021 C12orf77C9JDV5 145 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 ITGB1BP1O14713 200 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 TNFRSF13BO14836 293 aaPredicted RBP10.02□□□□□ -0.81
USF1-203ENST00000368021 DUS4LO95620 317 aaKnown RBP10.02□□□□□ -0.81
USF1-203ENST00000368021 RAB5AP20339 215 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 GZMHP20718 246 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 FGF7P21781 194 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 PPT1P50897 306 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 ZNF383Q8NA42 475 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 MITD1Q8WV92 249 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 TMEM230Q96A57 120 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 GALMQ96C23 342 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 CCL13Q99616 98 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 TREM1Q9NP99 234 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 OR6C3Q9NZP0 311 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 KAAG1Q9UBP8 84 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 OR2W1Q9Y3N9 320 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
USF1-203ENST00000368021 TRAV39A0A0B4J263 110 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 NDUFS8O00217 210 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 TMPRSS2O15393 492 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 FXYD4P59646 89 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 EDDM3AQ14507 147 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 C5orf24Q7Z6I8 188 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 IL1F10Q8WWZ1 152 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 TOMM40LQ969M1 308 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 RSRP1Q9BUV0 290 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 GAL3ST2Q9H3Q3 398 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 PRDM13Q9H4Q3 707 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
USF1-203ENST00000368021 USF3Q68DE3 2245 aa10□□□□□ -0.81
USF1-203ENST00000368021 SPINT2O43291 252 aa10□□□□□ -0.81
USF1-203ENST00000368021 HBZP02008 142 aa10□□□□□ -0.81
USF1-203ENST00000368021 PI3P19957 117 aa10□□□□□ -0.81
USF1-203ENST00000368021 SUPT4H1P63272 117 aaKnown RBP10□□□□□ -0.81
USF1-203ENST00000368021 HTD2P86397 168 aa10□□□□□ -0.81
USF1-203ENST00000368021 FAM185AQ8N0U4 392 aa10□□□□□ -0.81
USF1-203ENST00000368021 PRR18Q8N4B5 295 aa10□□□□□ -0.81
USF1-203ENST00000368021 FAM216BQ8N7L0 139 aa10□□□□□ -0.81
USF1-203ENST00000368021 TPRX1Q8N7U7 411 aa10□□□□□ -0.81
USF1-203ENST00000368021 MRGPRDQ8TDS7 321 aa10□□□□□ -0.81
USF1-203ENST00000368021 PHB2Q99623 299 aa10□□□□□ -0.81
USF1-203ENST00000368021 RAB9BQ9NP90 201 aa10□□□□□ -0.81
USF1-203ENST00000368021 LAMP3Q9UQV4 416 aa10□□□□□ -0.81
USF1-203ENST00000368021 GOLT1BQ9Y3E0 138 aa10□□□□□ -0.81
USF1-203ENST00000368021 A0A0B4J2A0 478 aa10□□□□□ -0.81
USF1-203ENST00000368021 CRYM-AS1A6NIL9 109 aa10□□□□□ -0.81
USF1-203ENST00000368021 C15orf65H3BRN8 121 aa10□□□□□ -0.81
USF1-203ENST00000368021 HSPA12AO43301 675 aa10□□□□□ -0.81
USF1-203ENST00000368021 CIDEAO60543 219 aa10□□□□□ -0.81
USF1-203ENST00000368021 SFT2D2O95562 160 aa10□□□□□ -0.81
USF1-203ENST00000368021 COL8A2P25067 703 aa10□□□□□ -0.81
USF1-203ENST00000368021 GNRHRP30968 328 aa10□□□□□ -0.81
USF1-203ENST00000368021 IL2RGP31785 369 aa10□□□□□ -0.81
USF1-203ENST00000368021 NPBWR1P48145 328 aa10□□□□□ -0.81
USF1-203ENST00000368021 CAV2P51636 162 aa10□□□□□ -0.81
USF1-203ENST00000368021 EDDM3BP56851 147 aa10□□□□□ -0.81
USF1-203ENST00000368021 PIGPP57054 158 aa10□□□□□ -0.81
USF1-203ENST00000368021 TNFRSF9Q07011 255 aa10□□□□□ -0.81
USF1-203ENST00000368021 USF2Q15853 346 aaPredicted RBP10□□□□□ -0.81
USF1-203ENST00000368021 ABCA11PQ4W5N1 156 aa10□□□□□ -0.81
USF1-203ENST00000368021 C11orf88Q6PI97 169 aa10□□□□□ -0.81
USF1-203ENST00000368021 DUX4L9Q6RFH8 374 aaPredicted RBP10□□□□□ -0.81
USF1-203ENST00000368021 SPNS3Q6ZMD2 512 aa10□□□□□ -0.81
USF1-203ENST00000368021 SGPP2Q8IWX5 399 aa10□□□□□ -0.81
USF1-203ENST00000368021 SMDT1Q9H4I9 107 aa10□□□□□ -0.81
USF1-203ENST00000368021 SLC2A9Q9NRM0 540 aa10□□□□□ -0.81
USF1-203ENST00000368021 OR1A1Q9P1Q5 309 aa10□□□□□ -0.81
USF1-203ENST00000368021 SHPKQ9UHJ6 478 aa10□□□□□ -0.81
USF1-203ENST00000368021 IGKV1D-13A0A0B4J2D9 117 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 HSBP1L1C9JCN9 74 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 MED6O75586 246 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 IGKV1-13P0DP09 117 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 HLA-GP17693 338 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 CD34P28906 385 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 SSTR5P35346 364 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 RND3P61587 244 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 TGIF2LXQ8IUE1 241 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 CCDC71LQ8N9Z2 235 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
USF1-203ENST00000368021 OR1S2Q8NGQ3 325 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 OR1L1Q8NH94 360 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 FAM216AQ8WUB2 273 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 GALNT14Q96FL9 552 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 SLC25A10Q9UBX3 287 aaPredicted RBP9.99□□□□□ -0.81
USF1-203ENST00000368021 TNFSF18Q9UNG2 199 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 ARID1AO14497 2285 aa9.99□□□□□ -0.81
USF1-203ENST00000368021 PRRC2AP48634 2157 aaKnown RBP9.98□□□□□ -0.81
USF1-203ENST00000368021 TRGV10A0A0A0MS01 117 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms