RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 C21orf140B9A014 251 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 TMPRSS2O15393 492 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 RRP8O43159 456 aaKnown RBP4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 CLDN14O95500 239 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 TRGC2P03986 189 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 IFNA4P05014 189 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 FAM87AP0C7U9 286 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 FGF7P21781 194 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 THBS3P49746 956 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 MRPL49Q13405 166 aaKnown RBP4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 SURF2Q15527 256 aaPredicted RBP4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 ZNF726P1Q15940 193 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 NMSQ5H8A3 153 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 WDR82Q6UXN9 313 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 LYG1Q8N1E2 194 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 OR4F5Q8NH21 305 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 SPSB4Q96A44 273 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 GALNT14Q96FL9 552 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 OR4F4Q96R69 305 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 ASCL2Q99929 193 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 SEC11CQ9BY50 192 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 PRO1933Q9H354 126 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 HIVEP3Q5T1R4 2406 aa4.71□□□□□ -1.66
TNFSF4-202ENST00000367718 USP9XQ93008 2570 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 IGKV3D-15A0A087WSY6 115 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 IGHV1-18A0A0C4DH31 117 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 LRP5LA4QPB2 252 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 REG1AP05451 166 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 CCL3L1P16619 93 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 CD24P25063 80 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 S100GP29377 79 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 HOXA6P31267 233 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ZNF134P52741 427 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 FAM3BP58499 235 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 RPS23P62266 143 aaKnown RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 EIF5AP63241 154 aaKnown RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ACSF3Q4G176 576 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SPSB3Q6PJ21 355 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SPNS3Q6ZMD2 512 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 H2BFWTQ7Z2G1 175 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 WDR31Q8NA23 367 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 NANOS1Q8WY41 292 aaKnown RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 PINX1Q96BK5 328 aaKnown RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SNX22Q96L94 193 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SLC35B3Q9H1N7 401 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SMCO4Q9NRQ5 59 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 LYRM2Q9NU23 88 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 PRELID3BQ9Y3B1 194 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 HRNRQ86YZ3 2850 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ZANQ9Y493 2812 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 TMEM265A0A087WTH1 108 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ARPC4-TTLL3A0A0A6YYG9 625 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 A0A1W2PPQ1 181 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 K7N7A8 449 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SIAH2O43255 324 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 CD5P06127 495 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 NAAAQ02083 359 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 DIAPH2-AS1Q14236 149 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 PRAMEF5Q5TYX0 476 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 ACSM6Q6P461 480 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 IL34Q6ZMJ4 242 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SEM1Q6ZVN7 128 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 H1FOOQ8IZA3 346 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 LINC00518Q8N0U6 118 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 Q8WTZ3 238 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 PARP11Q9NR21 331 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 SLC39A9Q9NUM3 307 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 TP53TG5Q9Y2B4 290 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 S4R3C0 116 aa4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 COL5A1P20908 1838 aaPredicted RBP4.7□□□□□ -1.66
TNFSF4-202ENST00000367718 DSCAMO60469 2012 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 TRAV20A0A0B4J274 112 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 IGHV2OR16-5A0A0B4J2B6 119 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 MAP1LC3B2A6NCE7 125 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 DVL1O14640 695 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 PAGE4O60829 102 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 OR9G9P0C7N8 305 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 UCP1P25874 307 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 PRDX2P32119 198 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 GPR12P47775 334 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 FFAR4Q5NUL3 377 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 C10orf55Q5SWW7 151 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 ZNF474Q6S9Z5 364 aaPredicted RBP4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 C1orf87Q8N0U7 546 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 NHLRC2Q8NBF2 726 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 TVP23CQ96ET8 276 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 MAP1LC3BQ9GZQ8 125 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 RPH3ALQ9UNE2 315 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 LINC00587B1AMM8 73 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 RRHO14718 337 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 TAAR5O14804 337 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 DNPH1O43598 174 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 RAB5AP20339 215 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 BRWD1-AS2P59051 145 aa4.69□□□□□ -1.66
TNFSF4-202ENST00000367718 RAB5BP61020 215 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms