RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 A6NJ64 397 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 LINC00473A8K010 186 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 FAM25AB3EWG3 89 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 FAM25CB3EWG5 89 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 FAM25GB3EWG6 89 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 G3V318 75 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 AADACP22760 399 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 RORCP51449 518 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 FXYD4P59646 89 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 CD83Q01151 205 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 SRSF7Q16629 238 aaKnown RBP eCLIP11.52□□□□□ -0.57
SF3B5-201ENST00000367569 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 CNIH2Q6PI25 160 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 NDUFA11Q86Y39 141 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 OR8H1Q8NGG4 311 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 CASTOR1Q8WTX7 329 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 CHPT1Q8WUD6 406 aa11.52□□□□□ -0.57
SF3B5-201ENST00000367569 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
SF3B5-201ENST00000367569 FAM103A1Q9BTL3 118 aaKnown RBP11.52□□□□□ -0.57
SF3B5-201ENST00000367569 METTL1Q9UBP6 276 aaKnown RBP11.52□□□□□ -0.57
SF3B5-201ENST00000367569 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 AP4M1O00189 453 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 FCN1O00602 326 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 RRHO14718 337 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 TNFSF12O43508 249 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 SLC25A17O43808 307 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 TUSC2O75896 110 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 NDUFA3O95167 84 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 PF4V1P10720 104 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 FCGR2CP31995 323 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 LUMP51884 338 aaPredicted RBP11.51□□□□□ -0.57
SF3B5-201ENST00000367569 RPS16P62249 146 aaKnown RBP11.51□□□□□ -0.57
SF3B5-201ENST00000367569 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
SF3B5-201ENST00000367569 SECTM1Q8WVN6 248 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 HARBI1Q96MB7 349 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 OR2W1Q9Y3N9 320 aa11.51□□□□□ -0.57
SF3B5-201ENST00000367569 NUDT19A8MXV4 375 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 DIRAS3O95661 229 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 CA2P00918 260 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 HLA-DRB1P01911 266 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 PMP2P02689 132 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 RPLP1P05386 114 aaKnown RBP11.5□□□□□ -0.57
SF3B5-201ENST00000367569 VDAC1P21796 283 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 MC5RP33032 325 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
SF3B5-201ENST00000367569 GNB1P62873 340 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 RPL30P62888 115 aaKnown RBP11.5□□□□□ -0.57
SF3B5-201ENST00000367569 TAGLNQ01995 201 aaKnown RBP11.5□□□□□ -0.57
SF3B5-201ENST00000367569 PSG5Q15238 335 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 LAX1Q8IWV1 398 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 ZNF645Q8N7E2 425 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 NPBQ8NG41 125 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 OR51J1Q9H342 316 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 TAS2R8Q9NYW2 309 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 EHFQ9NZC4 300 aa11.5□□□□□ -0.57
SF3B5-201ENST00000367569 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
SF3B5-201ENST00000367569 TMEM127O75204 238 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 CRYZL1O95825 349 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 APOA1P02647 267 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 OR5H8P0DN80 308 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 THBS3P49746 956 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 SLC35B1P78383 322 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 C8orf86Q6ZUL3 223 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 REC114Q7Z4M0 266 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 KLHL30-AS1Q8NEE0 82 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 OR4F17Q8NGA8 305 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 TCTEX1D2Q8WW35 142 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 OR4F4Q96R69 305 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 MIXL1Q9H2W2 232 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 GHITMQ9H3K2 345 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 CCL28Q9NRJ3 127 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 NECAP2Q9NVZ3 263 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
SF3B5-201ENST00000367569 RBMX2Q9Y388 322 aaKnown RBP11.49□□□□□ -0.57
SF3B5-201ENST00000367569 H3BMQ9 156 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 SHOXO15266 292 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 NOL3O60936 208 aaKnown RBP11.48□□□□□ -0.57
SF3B5-201ENST00000367569 FCGR3BO75015 233 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 RBBP9O75884 186 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 PPYP01298 95 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 IGLV2-23P01705 113 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 PF4P02776 101 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 CTXN2P0C2S0 81 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 ZNF182P17025 639 aaPredicted RBP11.48□□□□□ -0.57
SF3B5-201ENST00000367569 HLA-DMAP28067 261 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 PRSS3P35030 304 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 CBX5P45973 191 aa11.48□□□□□ -0.57
SF3B5-201ENST00000367569 RPL5P46777 297 aaKnown RBP11.48□□□□□ -0.57
SF3B5-201ENST00000367569 RFX2P48378 723 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms