RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 GSX1Q9H4S2 264 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ASCL3Q9NQ33 180 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 FBLN5Q9UBX5 448 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PPIAL4EA0A075B759 164 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 MED19A0JLT2 244 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PPIAL4DF5H284 164 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PPIAL4FP0DN26 164 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PRDX2P32119 198 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 COL10A1Q03692 680 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ELOBQ15370 118 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 KRTCAP3Q53RY4 240 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SMIM8Q96KF7 97 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM191AQ9H0A3 160 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF98A6NK75 572 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 AHRRA9YTQ3 701 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 EFEMP2O95967 443 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 NUTF2P61970 127 aaKnown RBP7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CCL8P80075 99 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 KLRB1Q12918 225 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 PCOLCEQ15113 449 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 NCMAPQ5T1S8 102 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 LRP11Q86VZ4 500 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 SYT8Q8NBV8 401 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 OR1K1Q8NGR3 316 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 DYRK2Q92630 601 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM140Q9NV12 185 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CEP290O15078 2479 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 A0A1W2PRX2 142 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 ISLRO14498 428 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CSN3P07498 182 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 FAM214BQ7L5A3 538 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 OR10J6PQ8NGY7 276 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF596Q8TC21 504 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 IL19Q9UHD0 177 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 IGHV3OR16-10A0A075B7F0 116 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 PRR19A6NJB7 356 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 J3QRE1 110 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 MPZP25189 248 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 RND3P61587 244 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-205ENST00000367251 OR5AU1Q8NGC0 362 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 OR51B2Q9Y5P1 312 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 SHISA3A0PJX4 238 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 RD3LP0DJH9 198 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CAMPP49913 170 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 IGSF11Q5DX21 431 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF841Q6ZN19 808 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 PSMG3Q9BT73 122 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-205ENST00000367251 PILRBQ9UKJ0 227 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 WNT9BO14905 357 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CLDN14O95500 239 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 OR2H2O95918 312 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 EMP1P54849 157 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 C16orf82Q7Z2V1 217 aa7.76□□□□□ -1.17
SYNE1-205ENST00000367251 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
SYNE1-205ENST00000367251 GVINP1Q7Z2Y8 2422 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 P01737 135 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ADRA2AP08913 450 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 IGFBP3P17936 291 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 SFXN3Q9BWM7 321 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 AKAP6Q13023 2319 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 NYNRINQ9P2P1 1898 aaKnown RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 A0A087X0M5 115 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 A0A1B0GX30 115 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 PRR33A8MZF0 331 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 SPINK2P20155 84 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ZP1P60852 638 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM251Q8N6I4 163 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 WNT2BQ93097 391 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 C19orf24Q9BVV8 132 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 PLSCR2Q9NRY7 297 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 CEP250Q9BV73 2442 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 J3QR06 171 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 CORTO00230 105 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 LMX1BO60663 402 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF253O75346 499 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 NUDT3O95989 172 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 HBZP02008 142 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF137PP52743 207 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 SELENOTP62341 195 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 AESQ08117 197 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 RGP1Q92546 391 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 HARBI1Q96MB7 349 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 OR2V2Q96R30 315 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 AICDAQ9GZX7 198 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 MRPS18CQ9Y3D5 142 aaKnown RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 HS3ST3B1Q9Y662 390 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 MC5RP33032 325 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 COMPP49747 757 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF343Q6P1L6 599 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF738Q8NE65 137 aa7.75□□□□□ -1.17
SYNE1-205ENST00000367251 NUP214P35658 2090 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-205ENST00000367251 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms