RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GBGT1Q8N5D6 347 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 A0A1W2PR80 420 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR4C13Q8NGP0 309 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 FZR1Q9UM11 496 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 KCNMB2Q9Y691 235 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 HKR1P10072 659 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 UBALD1Q8TB05 177 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 ISOC2Q96AB3 205 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 DLL1O00548 723 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 GPR179Q6PRD1 2367 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR2H2O95918 312 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PPP1CCP36873 323 aaKnown RBP10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 SLC25A53Q5H9E4 307 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 TMEM251Q8N6I4 163 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 ASCL3Q9NQ33 180 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PPIAL4EA0A075B759 164 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PPIAL4DF5H284 164 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PPIAL4FP0DN26 164 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 CRYBA2P53672 197 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 LCN2P80188 198 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 SLC35E4Q6ICL7 350 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 PPIAL4AQ9Y536 164 aa10.37□□□□□ -0.75
CDC42BPA-203ENST00000366766 COL10A1Q03692 680 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 IZUMO4Q1ZYL8 232 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 TRAV9-1A0A075B6T8 112 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ERVH48-1M5A8F1 160 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 SCGB1C2P0DMR2 95 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 IGSF11Q5DX21 431 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 C16orf82Q7Z2V1 217 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 RD3LP0DJH9 198 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ID1P41134 155 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZXDAP98168 799 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 C4orf51C9J302 202 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 KCNAB3O43448 404 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 PRSS53Q2L4Q9 553 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 A6NJY4 79 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 SRD5A3Q9H8P0 318 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 KLF7O75840 302 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF146Q15072 292 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF430Q9H8G1 570 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 HS3ST3B1Q9Y662 390 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 IL9P15248 144 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 COA4Q9NYJ1 87 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZFP30Q9Y2G7 519 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 IGLV3-32A0A0A0MS00 114 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 CIDEAO60543 219 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 Q1RN00 199 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 COL5A1-AS1Q5SY13 56 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 SDHCQ99643 169 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 RSRP1Q9BUV0 290 aa10.36□□□□□ -0.75
CDC42BPA-203ENST00000366766 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 CEACAM18A8MTB9 384 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 ACACBO00763 2458 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 WNK1Q9H4A3 2382 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 RPLP1P05386 114 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 RCC1P18754 421 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 PGLYRP1O75594 196 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 GAMTQ14353 236 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 LYPD8Q6UX82 237 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 Q6ZT83 130 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 ARFGEF3Q5TH69 2177 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 TM4SF5O14894 197 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 COX7A1P24310 79 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 CLDN18P56856 261 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 SPSB2Q99619 263 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 DOK5Q9P104 306 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 BDP1A6H8Y1 2624 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 A8MXK9 166 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 EGR4Q05215 589 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 MSL2Q9HCI7 577 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 FOXD3Q9UJU5 478 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 GLIPR1P48060 266 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 PCOLCEQ15113 449 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 ERASQ7Z444 233 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF552Q9H707 407 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 ZNF729A6NN14 1252 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 HSPE1P61604 102 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 FGFRL1Q8N441 504 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 DLL3Q9NYJ7 618 aa10.35□□□□□ -0.75
CDC42BPA-203ENST00000366766 A0A087WWC5 75 aa10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 PUSL1Q8N0Z8 303 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 SPSB4Q96A44 273 aa10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 PLPPR2Q96GM1 343 aa10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 C11orf42Q8N5U0 333 aa10.34□□□□□ -0.75
CDC42BPA-203ENST00000366766 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms