RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 RBP4P02753 201 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 MELTFP08582 738 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ERP29P30040 261 aaKnown RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 IER3P46695 156 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 GLIPR1P48060 266 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 VEGFCP49767 419 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 UBE2E1P51965 193 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 DLX6P56179 175 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 RPL31P62899 125 aaKnown RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 ACTG1P63261 375 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 AESQ08117 197 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ZNF273Q14593 569 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ATXN7L3Q14CW9 347 aaPredicted RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 GRK1Q15835 563 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 PAN3Q58A45 887 aaKnown RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 RSBN1Q5VWQ0 802 aaPredicted RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 RUSC1-AS1Q66K80 236 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 RAB12Q6IQ22 244 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 HCP5Q6MZN7 132 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 C16orf87Q6PH81 154 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 C6orf201Q7Z4U5 140 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 CROCCP3Q8IVE0 287 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 GAPTQ8N292 157 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 OR4M1Q8NGD0 313 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 OR5D13Q8NGL4 314 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 SSMEM1Q8WWF3 244 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 H1FXQ92522 213 aaKnown RBP6.22□□□□□ -1.41
YBX3-204ENST00000366290 DYRK2Q92630 601 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 LHX4Q969G2 390 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 C17orf77Q96MU5 243 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 SULT4A1Q9BR01 284 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ABRACLQ9P1F3 81 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ONECUT1Q9UBC0 465 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 GLS2Q9UI32 602 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 SPATA2Q9UM82 520 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 KCNK7Q9Y2U2 307 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 MMP24Q9Y5R2 645 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 ETV7Q9Y603 341 aa6.22□□□□□ -1.41
YBX3-204ENST00000366290 CMYA5Q8N3K9 4069 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 A0A0U1RQK1 487 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 MDFIC2A0A1B0GVS7 189 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 SMIM31A0A1B0GVY4 71 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 A0A1W2PPI3 338 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 C17orf98A8MV24 154 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 MFNGO00587 321 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 CGB3P0DN86 165 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 CGB7P0DN87 165 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 CCL3L1P16619 93 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 FUT3P21217 361 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 BLVRBP30043 206 aaPredicted RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 KCNJ3P48549 501 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 RORCP51449 518 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 DLX1P56177 255 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 MEF2CQ06413 473 aaPredicted RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 DYNC1I2Q13409 638 aaKnown RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 EDDM3AQ14507 147 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 AANATQ16613 207 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 ATAD3CQ5T2N8 411 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 OLFML2AQ68BL7 652 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 C12orf54Q6X4T0 127 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 ZNF497Q6ZNH5 498 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 GDPD3Q7L5L3 318 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 OR13A1Q8NGR1 328 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 ARHGAP5-AS1Q96IT6 56 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 URM1Q9BTM9 101 aaKnown RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 PECRQ9BY49 303 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 SLIRPQ9GZT3 109 aaKnown RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 RHBDL2Q9NX52 303 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 CCDC59Q9P031 241 aaKnown RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 RSL24D1Q9UHA3 163 aaKnown RBP6.21□□□□□ -1.42
YBX3-204ENST00000366290 KIF25Q9UIL4 384 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 PEX16Q9Y5Y5 336 aa6.21□□□□□ -1.42
YBX3-204ENST00000366290 TRAV39A0A0B4J263 110 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 A0A1B0GUS0 222 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 A0A1W2PRV1 198 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 ODAMA1E959 279 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 NPFFO15130 113 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 NDUFA7O95182 113 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 NAPSAO96009 420 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 MT-ND4P03905 459 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 GLAP06280 429 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 EIF4EP06730 217 aaKnown RBP6.2□□□□□ -1.42
YBX3-204ENST00000366290 FBP1P09467 338 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 SAA4P35542 130 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 RANBP1P43487 201 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 EDDM3BP56851 147 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 ERVFC1-1P60608 527 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 C17orf58Q2M2W7 97 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 SLC35E4Q6ICL7 350 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 C5orf24Q7Z6I8 188 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 OR56B1Q8NGI3 324 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 OR10R2Q8NGX6 335 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 MRPL30Q8TCC3 161 aaKnown RBP6.2□□□□□ -1.42
YBX3-204ENST00000366290 CORO2AQ92828 525 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 HDHD3Q9BSH5 251 aaPredicted RBP6.2□□□□□ -1.42
YBX3-204ENST00000366290 FAAP24Q9BTP7 215 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 CHIAQ9BZP6 476 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 NXF2Q9GZY0 626 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms